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qh_10_scaffold_277

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_277_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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55..435
DNA (381bp) protein (127aa)
transposase IS200-family protein id=24630500 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Transposase {ECO:0000313|EMBL:ERG92790.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
transposase IS200-family protein
qh_10_scaffold_277_2
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

432..1727
DNA (1296bp) protein (432aa)
IS1341-type transposase (TCE32) n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7L9_9EURY
IS1341-type transposase (TCE32) {ECO:0000313|EMBL:ELY69712.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 1
tnp1; IS1341-type transposase (TCE32)
qh_10_scaffold_277_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1775..2497)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20225.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_277_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2690..4045)
DNA (1356bp) protein (452aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY6_9EURY
qh_10_scaffold_277_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4238..6244
DNA (2007bp) protein (669aa)
Pas domain s-box n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9G5_9EURY
pas domain s-box
Pas domain s-box {ECO:0000313|EMBL:AGN02643.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qh_10_scaffold_277_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6396..6734)
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ELZ20301.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ELZ20301.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosi
peptidyl-tRNA hydrolase, archaeal type (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAI0_9EURY
qh_10_scaffold_277_7

Not on your lists

6824..7099
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V5A8G9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11905.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
qh_10_scaffold_277_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7150..7794)
DNA (645bp) protein (215aa)
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D509_9EURY
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP {ECO:0000313|EMBL:ELZ30566.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Ha
cob(I)alamin adenosyltransferase
qh_10_scaffold_277_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7791..8867)
DNA (1077bp) protein (359aa)
UPF0284 protein HalDL1DRAFT_2923 n=1 Tax=Halobacterium sp. DL1 RepID=G4IIN4_9EURY
UPF0284 protein HALDL1_04515 {ECO:0000256|HAMAP-Rule:MF_01086}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
cobT; hypothetical protein
qh_10_scaffold_277_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9096..11639
DNA (2544bp) protein (848aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=797114 species="Archaea; Euryarchaeo
DNA topoisomerase 1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEE5_9EURY
DNA topoisomerase I
qh_10_scaffold_277_11
unknown

Not on your lists

comp(11645..12523)
DNA (879bp) protein (293aa)

This feature has no annotations

qh_10_scaffold_277_12
unknown

Not on your lists

comp(12720..13016)
DNA (297bp) protein (99aa)

This feature has no annotations

qh_10_scaffold_277_13
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13126..13479)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037DE377
Rieske [2Fe-2S] domain containing oxidoreductase {ECO:0000313|EMBL:GAD52533.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum ac
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
qh_10_scaffold_277_14
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13528..14490)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JPE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA09530.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
qh_10_scaffold_277_15
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14528..16009
DNA (1482bp) protein (494aa)
Molybdopterin-based tungsten cofactor biosynthesis protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JKL8_9EURY
Molybdopterin-based tungsten cofactor biosynthesis protein {ECO:0000313|EMBL:EMA09531.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" s
radical SAM domain protein
qh_10_scaffold_277_16
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16009..16707
DNA (699bp) protein (233aa)
S-adenosylmethionine-dependent methyltransferase (EC:2.1.1.-)
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JK93_9EURY
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:EMA09532.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
qh_10_scaffold_277_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16757..17473
DNA (717bp) protein (239aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAJ7_9EURY
geranylgeranylglyceryl phosphate synthase
qh_10_scaffold_277_18
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17506..19719)
DNA (2214bp) protein (738aa)
Amino acid permease n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XXJ9_9EURY
Amino acid permease {ECO:0000313|EMBL:ELY66544.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
amino acid transporter
qh_10_scaffold_277_19
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19952..20422)
DNA (471bp) protein (157aa)
Asn family transcriptional regulator n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAE0_9EURY
Lrp/AsnC family transcription regulator
Asn family transcriptional regulator {ECO:0000313|EMBL:EMA17124.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amy
qh_10_scaffold_277_20
unknown

Not on your lists

20594..20719
DNA (126bp) protein (42aa)

This feature has no annotations

qh_10_scaffold_277_21
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20834..21160
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=M0IUQ0_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK19968.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
qh_10_scaffold_277_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


21378..22682
DNA (1305bp) protein (435aa)
Aspartate--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAE2_9EURY
Aspartyl-tRNA ligase {ECO:0000313|EMBL:ELZ20266.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
aspC; aspartyl-tRNA synthetase
qh_10_scaffold_277_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22753..23577)
DNA (825bp) protein (275aa)
Rhodopsin n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1H6_HALMD
rhodopsin
Rhodopsin {ECO:0000313|EMBL:ACV47184.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7
qh_10_scaffold_277_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23800..24012
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAE9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20271.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_277_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24058..24915
DNA (858bp) protein (286aa)
GHMP kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD32_9EURY
GHMP kinase {ECO:0000313|EMBL:ELZ20272.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
GHMP kinase
qh_10_scaffold_277_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25069..25812
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAK8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20275.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_277_27
unknown

Not on your lists

25916..26224
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 27 items

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