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qh_10_scaffold_4538

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_4538_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..136
DNA (135bp) protein (45aa)
DUF188 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM6_NATPD
rpo operon protein
DUF188 family protein {ECO:0000313|EMBL:CAI50632.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
qh_10_scaffold_4538_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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138..707
DNA (570bp) protein (190aa)
rpoE1; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:CAI50631.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI50631.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit E n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM7_NATPD
qh_10_scaffold_4538_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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708..905
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM8_NATPD
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
qh_10_scaffold_4538_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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907..1446
DNA (540bp) protein (180aa)
UPF0218 protein Nmlp_1554 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKE6_NATM8
UPF0218 family protein
UPF0218 protein Nmlp_1554 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qh_10_scaffold_4538_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1698..2012
DNA (315bp) protein (105aa)
30S ribosomal protein S24e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY38_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
rps24e; 30S ribosomal protein S24
qh_10_scaffold_4538_6
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2013..2147
DNA (135bp) protein (45aa)
30S ribosomal protein S27ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVX9_9EURY
30S ribosomal protein S27a
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenic
qh_10_scaffold_4538_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2151..3617
DNA (1467bp) protein (489aa)
O-sialoglycoprotein endopeptidase/protein kinase (EC:2.7.1.- 3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=KAE1B_NATPD
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000255|HAMAP-Rule:MF_01447}; Includes:; tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01447
qh_10_scaffold_4538_8
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3663..3938
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YSH0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY76417.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qh_10_scaffold_4538_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4771..6069
DNA (1299bp) protein (433aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000255|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00127}; Short=HisRS {ECO:0000255|HAMAP-Rul
Histidine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYH_NATPD
qh_10_scaffold_4538_10
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6120..6365
DNA (246bp) protein (82aa)
Uncharacterized protein n=4 Tax=Haloferax RepID=D4GZ36_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELK53324.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
qh_10_scaffold_4538_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6418..7224
DNA (807bp) protein (269aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRUA_NATPD
qh_10_scaffold_4538_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7262..8221
DNA (960bp) protein (320aa)
pepF; oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase PepF {ECO:0000313|EMBL:CAI50611.1}; EC=3.4.24.- {ECO:0000313|EMBL:CAI50611.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Oligoendopeptidase PepF n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMP7_NATPD
Displaying 12 items

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