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qh_10_scaffold_1942

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_1942_1
unknown

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2..169
DNA (168bp) protein (56aa)

This feature has no annotations

qh_10_scaffold_1942_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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216..479
DNA (264bp) protein (88aa)
hypothetical protein id=24614105 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP89403.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qh_10_scaffold_1942_3
unknown

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comp(560..805)
DNA (246bp) protein (82aa)

This feature has no annotations

qh_10_scaffold_1942_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(818..1366)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS28_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92797.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_10_scaffold_1942_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1366..1614)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:ACV12012.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_10_scaffold_1942_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1656..1988)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92795.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_10_scaffold_1942_7
unknown

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comp(2076..2747)
DNA (672bp) protein (224aa)

This feature has no annotations

qh_10_scaffold_1942_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2847..4100)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HY43_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56844.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qh_10_scaffold_1942_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4169..4993)
DNA (825bp) protein (275aa)
hypothetical protein; K03476 L-ascorbate 6-phosphate lactonase [EC:3.1.1.-] id=24647420 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative Zn-dependent hydrolase {ECO:0000313|EMBL:ERH08568.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
Zn-dependent hydrolase
qh_10_scaffold_1942_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5077..5595
DNA (519bp) protein (173aa)
hypothetical protein; K07561 diphthamide synthase subunit DPH2 id=24655356 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Diphthamide biosynthesis enzyme Dph2 {ECO:0000313|EMBL:ERG88838.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
diphthamide biosynthesis protein
qh_10_scaffold_1942_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5582..6085
DNA (504bp) protein (168aa)
Suspect SCG annotation. See neighboring gene [qh_10_scaffold_1942_10].
Diphthamide biosynthesis enzyme Dph2 {ECO:0000313|EMBL:ERG88838.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein; K07561 diphthamide synthase subunit DPH2 id=24655356 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
dph2; diphthamide biosynthesis protein
qh_10_scaffold_1942_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6087..6632
DNA (546bp) protein (182aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=halophilic archaeon J07HX5 RepID=U1MHN6_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERG88839.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
methylase involved in ubiquinone/menaquinone biosynthesis
qh_10_scaffold_1942_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6687..7316
DNA (630bp) protein (210aa)
Putative RNA methylase n=1 Tax=halophilic archaeon J07HX5 RepID=U1P5S3_9EURY
Putative RNA methylase {ECO:0000313|EMBL:ERG88862.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
probable rRNA methyltransferase
qh_10_scaffold_1942_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7382..7555
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MXZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88868.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qh_10_scaffold_1942_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7911..8285)
DNA (375bp) protein (125aa)
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC:2.5.1.-); K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] id=24627900 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC:2.5.1.-)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000313|EMBL:ERG90648.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Hal
qh_10_scaffold_1942_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8442..10142)
DNA (1701bp) protein (567aa)
rhomboid protein (EC:3.4.21.-)
Rhomboid family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN7_NATPD
Rhomboid family protein {ECO:0000313|EMBL:CAI49206.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_10_scaffold_1942_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10222..10413
DNA (192bp) protein (64aa)
polY1; DNA-directed DNA polymerase Y (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=268739 species="Archaea; Euryarchaeota; Halob
DNA polymerase IV n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSQ2_NATM8
Displaying 17 items

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