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qh_10_scaffold_2523

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_2523_1
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..250
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH08073.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
qh_10_scaffold_2523_2
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

252..926
DNA (675bp) protein (225aa)
pccA; propionyl-CoA carboxylase biotin carboxylase component (EC:6.4.1.3)
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Halorubrum sp. J07HR59 RepID=U1QE09_9EURY
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:ERH03537.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
qh_10_scaffold_2523_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1006..1797
DNA (792bp) protein (264aa)
carbamoyl phosphate synthase n=1 Tax=Halomicrobium katesii RepID=UPI000372C928
carbamoyl-phosphate synthase L chain ATP-binding
Carbamoyl-phosphate synthase L chain ATP-binding {ECO:0000313|EMBL:ACV48681.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="
qh_10_scaffold_2523_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1766..1957
DNA (192bp) protein (64aa)
carbamoyl-phosphate synthase L chain ATP-binding; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14] id=24648233 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
accA_1; biotin carboxylase 1, acyl-CoA carboxylase, alpha subunit 1 (EC:6.3.4.14 6.4.1.-)
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:ERH09371.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_10_scaffold_2523_5
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2061..2477
DNA (417bp) protein (139aa)
Thioredoxin n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W1P2_9EURY
Thioredoxin {ECO:0000313|EMBL:ELY43257.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
thioredoxin
qh_10_scaffold_2523_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2540..2941
DNA (402bp) protein (134aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX5 RepID=U1P6D9_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERG89132.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_2523_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3004..3756)
DNA (753bp) protein (251aa)
hypothetical protein; K07159 id=24655717 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
TIGR00162 family protein {ECO:0000313|EMBL:ERG89131.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_2523_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3946..4746)
DNA (801bp) protein (267aa)
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=24655715 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Translation initiation factor 2, alpha subunit (EIF-2alpha) {ECO:0000313|EMBL:ERG89129.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
eif2A; translation initiation factor IF-2 subunit alpha
qh_10_scaffold_2523_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4743..4916)
DNA (174bp) protein (58aa)
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e id=24655714 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
30S ribosomal protein S27E
qh_10_scaffold_2523_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4919..5179)
DNA (261bp) protein (87aa)
50S ribosomal protein L44e n=1 Tax=halophilic archaeon J07HX5 RepID=U1P6D6_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
rpl44e; 50S ribosomal protein L44
qh_10_scaffold_2523_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5294..5548
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0W6_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48981.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_10_scaffold_2523_12

Not on your lists

comp(5545..7449)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XTD2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11829.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qh_10_scaffold_2523_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7568..8248
DNA (681bp) protein (227aa)
Diphthine synthase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MY76_9EURY
Diphthine synthase {ECO:0000313|EMBL:ERG89125.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
diphthine synthase
qh_10_scaffold_2523_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8306..9214
DNA (909bp) protein (303aa)
tRNA and rRNA cytosine-C5-methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR15_9EURY
tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:ELZ25058.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
sun; tRNA and rRNA cytosine-C5-methylase
qh_10_scaffold_2523_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9211..9723
DNA (513bp) protein (171aa)
Pre-rRNA processing n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMX0_9EURY
hypothetical protein
Pre-rRNA processing {ECO:0000313|EMBL:ERJ07677.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ32666.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
qh_10_scaffold_2523_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9806..10822
DNA (1017bp) protein (339aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Protease HtpX homolog n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD95_9EURY
Zn-dependent protease with chaperone function
qh_10_scaffold_2523_17
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10837..12648)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P6B7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89107.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
Displaying 17 items

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