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qh_10_scaffold_447

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_447_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..146)
DNA (144bp) protein (48aa)
tfbB; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB id=24654732 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" s
tfb4; transcription initiation factor IIB
qh_10_scaffold_447_2
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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343..786
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ80707.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
qh_10_scaffold_447_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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862..2952
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P430_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47852.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_10_scaffold_447_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3359..4372)
DNA (1014bp) protein (338aa)
abc15r_2; ABC transporter id=24655492 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Phosphate uptake regulator {ECO:0000313|EMBL:ERG88952.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
phoU4; transcription regulator (homolog to phosphate uptake regulator)
qh_10_scaffold_447_5
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4760..5050
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
glutamyl-tRNA(Gln) amidotransferase subunit C
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C id=24620463 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
qh_10_scaffold_447_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5053..6333
DNA (1281bp) protein (427aa)
gatA; glutamyl-tRNA amidotransferase (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=159272
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=GATA_HALMA
qh_10_scaffold_447_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6382..6834)
DNA (453bp) protein (151aa)
UPF0179 protein C451_13044 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N222_9EURY
UPF0179 protein C451_13044 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
hypothetical protein
qh_10_scaffold_447_8
unknown

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6910..7608
DNA (699bp) protein (233aa)

This feature has no annotations

qh_10_scaffold_447_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7643..10318
DNA (2676bp) protein (892aa)
DNA mismatch repair protein MutS n=1 Tax=halophilic archaeon J07HX64 RepID=U1QVD5_9EURY
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA mismatch repair protein MutS
qh_10_scaffold_447_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10181..10915)
DNA (735bp) protein (245aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
Endonuclease NucS n=1 Tax=halophilic archaeon J07HX5 RepID=U1P8B8_9EURY
hypothetical protein
qh_10_scaffold_447_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10940..11473)
DNA (534bp) protein (178aa)
Uncharacterized protein (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MJX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89804.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qh_10_scaffold_447_12
unknown

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11580..13493
DNA (1914bp) protein (638aa)

This feature has no annotations

qh_10_scaffold_447_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13662..15323
DNA (1662bp) protein (554aa)
Archaeal thermosome subunit n=1 Tax=halophilic archaeon J07HX5 RepID=U1N024_9EURY
Archaeal thermosome subunit {ECO:0000313|EMBL:ERG89805.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
thermosome subunit
qh_10_scaffold_447_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15399..15677)
DNA (279bp) protein (93aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCI8_9EURY
phhB; pterin-4-alpha-carbinolamine dehydratase
qh_10_scaffold_447_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15811..16170)
DNA (360bp) protein (120aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase n=1 Tax=Halomicrobium katesii RepID=UPI000366A1E5
qh_10_scaffold_447_16
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16415..17095
DNA (681bp) protein (227aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1325472 species="Archae
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=halophilic archaeon J07HX5 RepID=U1N030_9EURY
qh_10_scaffold_447_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17105..17272)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITQ2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48481.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_10_scaffold_447_18
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17711..18334
DNA (624bp) protein (208aa)
hypothetical protein id=24654882 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89814.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_447_19
unknown

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18331..19089
DNA (759bp) protein (253aa)

This feature has no annotations

qh_10_scaffold_447_20
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18929..20062)
DNA (1134bp) protein (378aa)
ndh4; NADH dehydrogenase (EC:1.6.99.3)
NADH dehydrogenase, FAD-containing subunit (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCJ9_9EURY
NADH dehydrogenase, FAD-containing subunit {ECO:0000313|EMBL:ERG89816.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
qh_10_scaffold_447_21
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20364..20630
DNA (267bp) protein (89aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQQ9_HALVD
msrA1; peptide-methionine (S)-S-oxide reductase
qh_10_scaffold_447_22
unknown

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comp(20634..20909)
DNA (276bp) protein (92aa)

This feature has no annotations

qh_10_scaffold_447_23
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21282..21800)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Haloferax RepID=M0F4J7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ66007.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
qh_10_scaffold_447_24
unknown

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21832..22083
DNA (252bp) protein (84aa)

This feature has no annotations

qh_10_scaffold_447_25
unknown

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22247..22351
DNA (105bp) protein (35aa)

This feature has no annotations

qh_10_scaffold_447_26
unknown

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comp(22605..22937)
DNA (333bp) protein (111aa)

This feature has no annotations

qh_10_scaffold_447_27
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(22912..23205)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JC49_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16956.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_10_scaffold_447_28
unknown

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comp(23308..23496)
DNA (189bp) protein (63aa)

This feature has no annotations

qh_10_scaffold_447_29
unknown

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comp(23521..24018)
DNA (498bp) protein (166aa)

This feature has no annotations

qh_10_scaffold_447_30
unknown

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comp(24345..24446)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 30 items

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