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qh_10_scaffold_272

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_272_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..960
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34506.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qh_10_scaffold_272_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1060..1359
DNA (300bp) protein (100aa)
Nucleotide pyrophosphohydrolase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNU6_9EURY
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EMA46110.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
putative pyrophosphatase
qh_10_scaffold_272_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1476..2591
DNA (1116bp) protein (372aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC88_9EURY
qh_10_scaffold_272_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2670..3401
DNA (732bp) protein (244aa)
Ribonuclease BN n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGZ1_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA43690.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ribonuclease BN
qh_10_scaffold_272_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3398..3505
DNA (108bp) protein (36aa)
Ribonuclease BN n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N2K3_HALMO
Ribonuclease BN {ECO:0000313|EMBL:EMA51359.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
qh_10_scaffold_272_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3576..4436
DNA (861bp) protein (287aa)
Ribonuclease BN n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD78_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA43691.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ribonuclease BN
qh_10_scaffold_272_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4433..4879
DNA (447bp) protein (149aa)
Ribonuclease BN n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NER3_9EURY
Ribonuclease BN {ECO:0000313|EMBL:EMA55185.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
hypothetical protein
qh_10_scaffold_272_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4944..6314)
DNA (1371bp) protein (457aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MED2_9EURY
qh_10_scaffold_272_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6441..6899
DNA (459bp) protein (153aa)
AsnC family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG76_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:EMA43694.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
Transcription regulator AsnC-type-like protein
qh_10_scaffold_272_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6896..7240)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55182.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_10_scaffold_272_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7452..9149)
DNA (1698bp) protein (566aa)
Thermosome subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBE8_9EURY
Thermosome subunit alpha {ECO:0000313|EMBL:EMA55181.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
thermosome
qh_10_scaffold_272_12
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9301..9738)
DNA (438bp) protein (146aa)
sugar metabolism cluster protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037E78E9
Uncharacterized protein {ECO:0000313|EMBL:ELZ61513.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
hypothetical protein
qh_10_scaffold_272_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10271..11239)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55180.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_10_scaffold_272_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11414..11650)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52847.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_10_scaffold_272_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11643..12044)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIN5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44315.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_10_scaffold_272_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12124..12807)
DNA (684bp) protein (228aa)
Haloacid dehalogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC80_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:EMA55178.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
haloacid dehalogenase, type II
qh_10_scaffold_272_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12963..14168
DNA (1206bp) protein (402aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB32_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227456 species="Arc
eif2G; translation initiation factor IF-2 subunit gamma
qh_10_scaffold_272_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14165..14551
DNA (387bp) protein (129aa)
Putative RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBE3_9EURY
Putative RNA-binding protein {ECO:0000313|EMBL:EMA55176.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
putative RNA-binding protein
qh_10_scaffold_272_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


14551..15126
DNA (576bp) protein (192aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:EMA43703.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA43703.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoE'; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE0_9EURY
qh_10_scaffold_272_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15129..15326
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG84_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
DNA-directed RNA polymerase subunit E, RpoE2
qh_10_scaffold_272_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15328..15981
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH02_9EURY
UPF0218 protein C449_12837 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
conserved hypothetical protein (DUF359)
qh_10_scaffold_272_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16080..16427
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBD8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55171.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_10_scaffold_272_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16611..16751
DNA (141bp) protein (47aa)
Aldo/keto reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD61_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA43707.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
qh_10_scaffold_272_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16748..17023
DNA (276bp) protein (92aa)
Aldo/keto reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD61_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA43707.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
aldo/keto reductase
qh_10_scaffold_272_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17109..17429
DNA (321bp) protein (107aa)
30S ribosomal protein S24e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEE5_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545, ECO:0000256|RuleBase:RU004382}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rps24e; 30S ribosomal protein S24e
qh_10_scaffold_272_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17430..17564
DNA (135bp) protein (45aa)
30S ribosomal protein S27ae n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG89_9EURY
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
ribosomal protein S27AE
qh_10_scaffold_272_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17591..19240
DNA (1650bp) protein (550aa)
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH05_9EURY
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein {ECO:0000256|HAMAP-Rule:MF_01447}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
qh_10_scaffold_272_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19272..19541
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBD4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55166.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_10_scaffold_272_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


19580..20245
DNA (666bp) protein (222aa)
nucleoside-triphosphatase (EC:3.6.1.15)
Ditpase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEP5_9EURY
Ditpase {ECO:0000313|EMBL:EMA55165.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
qh_10_scaffold_272_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20327..20845
DNA (519bp) protein (173aa)
N-acetyltransferase GCN5 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDJ8_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA55164.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
N-acetyltransferase GCN5
Displaying items 1-30 of 39 in total

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