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qh_10_scaffold_273

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_273_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHD8_9EURY
flap endonuclease-1
qh_10_scaffold_273_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

323..1003
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05209.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_10_scaffold_273_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1020..1472)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53281.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_10_scaffold_273_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1551..2141
DNA (591bp) protein (197aa)
Methyl transferase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9E7_9EURY
Methyl transferase-like protein {ECO:0000313|EMBL:EMA53280.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
methyltransferase type 11
qh_10_scaffold_273_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2261..2686
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N828_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53279.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_10_scaffold_273_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2703..3026)
DNA (324bp) protein (108aa)
Ferredoxin n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6U4_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA53278.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
fdx; ferredoxin
qh_10_scaffold_273_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3046..4443)
DNA (1398bp) protein (466aa)
Selenium-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5S0_9EURY
Selenium-binding protein {ECO:0000313|EMBL:EMA53277.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
selenium-binding protein
qh_10_scaffold_273_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4581..5756)
DNA (1176bp) protein (392aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ1_9EURY
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EMA44775.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
dipeptidyl aminopeptidases/acylaminoacyl-peptidase
qh_10_scaffold_273_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5753..6463)
DNA (711bp) protein (237aa)
Dipeptidyl aminopeptidases/acylaminoacyl-peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5W8_9EURY
Dipeptidyl aminopeptidases/acylaminoacyl-peptidase {ECO:0000313|EMBL:EMA53276.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
peptidase S9 prolyl oligopeptidase active site domain protein
qh_10_scaffold_273_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6682..7755)
DNA (1074bp) protein (358aa)
Methionine synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9E4_9EURY
Methionine synthase {ECO:0000313|EMBL:EMA53275.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
vitamin-B12 independent methionine synthase
qh_10_scaffold_273_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7752..8159)
DNA (408bp) protein (136aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGB6_9EURY
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:EMA44777.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
Cobalamin-independent synthase MetE domain-containing protein
qh_10_scaffold_273_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9008..11659)
DNA (2652bp) protein (884aa)
Copper-transporting ATPase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNK8_9EURY
Copper-transporting ATPase {ECO:0000313|EMBL:EMA46000.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
copper-transporting ATPase
qh_10_scaffold_273_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11992..12189
DNA (198bp) protein (66aa)
Putative cation binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JCW3_9EURY
Putative cation binding protein {ECO:0000313|EMBL:EJN56964.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
copper chaperone
qh_10_scaffold_273_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12367..13215
DNA (849bp) protein (283aa)
Putative transcriptional regulator, AsnC family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK12_9EURY
Putative transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:EMA46012.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
putative transcriptional regulator, AsnC family protein
qh_10_scaffold_273_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13721..14290)
DNA (570bp) protein (190aa)
Methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ74_9EURY
Methyltransferase {ECO:0000313|EMBL:EMA47877.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
methyltransferase
qh_10_scaffold_273_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14290..15453)
DNA (1164bp) protein (388aa)
Mechanosensitive ion channel MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR92_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA47878.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
mechanosensitive ion channel MscS
qh_10_scaffold_273_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15581..15733)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49054.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_10_scaffold_273_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15824..16702)
DNA (879bp) protein (293aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB8_9EURY
qh_10_scaffold_273_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16782..17369)
DNA (588bp) protein (196aa)
RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA49056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
RNA-binding protein
qh_10_scaffold_273_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17409..17765)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY
qh_10_scaffold_273_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17762..18079)
DNA (318bp) protein (106aa)
50S ribosomal protein L21e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MT09_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L21e
qh_10_scaffold_273_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18135..18401)
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MTU2_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=122745
ef1B; elongation factor 1-beta
qh_10_scaffold_273_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18733..19959)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49061.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_10_scaffold_273_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19964..20878)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N3U0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA51370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_10_scaffold_273_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21207..21851
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW72_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA49064.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
qh_10_scaffold_273_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22104..22256)
DNA (153bp) protein (51aa)
Integrase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE90_9EURY
Integrase {ECO:0000313|EMBL:EMA56161.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
integrase
Displaying 26 items

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