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qh_10_scaffold_306

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_306_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..2279)
DNA (2277bp) protein (759aa)
DNA mismatch repair protein MutS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWA2_9EURY
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
mutS1b; DNA mismatch repair protein MutS
qh_10_scaffold_306_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2786..4147)
DNA (1362bp) protein (454aa)
Phosphomethylpyrimidine kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF78_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EMA43349.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
phosphomethylpyrimidine kinase
qh_10_scaffold_306_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4222..6093
DNA (1872bp) protein (624aa)
Amine oxidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC51_9EURY
Amine oxidase {ECO:0000313|EMBL:EMA43347.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
amine oxidase
qh_10_scaffold_306_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6080..6757)
DNA (678bp) protein (226aa)
DSBA oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW96_9EURY
DSBA oxidoreductase {ECO:0000313|EMBL:EMA49876.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
DSBA oxidoreductase
qh_10_scaffold_306_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6754..7428)
DNA (675bp) protein (225aa)
50S ribosomal protein L15e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZM3_9EURY
50S ribosomal protein L15e {ECO:0000256|HAMAP-Rule:MF_00256}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
50S ribosomal protein L15e
qh_10_scaffold_306_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7673..7864
DNA (192bp) protein (64aa)
UPF0391 membrane protein C449_15227 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC46_9EURY
UPF0391 membrane protein C449_15227 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane protein
qh_10_scaffold_306_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8360..8497
DNA (138bp) protein (46aa)
Transposase IS4 family protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MNS4_HALMO
Transposase IS4 family protein {ECO:0000313|EMBL:EMA47316.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae D
transposase-like protein
qh_10_scaffold_306_8
unknown

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comp(8518..8649)
DNA (132bp) protein (44aa)

This feature has no annotations

qh_10_scaffold_306_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8700..9461)
DNA (762bp) protein (254aa)
Transcription regulator n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMG9_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA09174.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
AsnC family transcriptional regulator
qh_10_scaffold_306_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10053..10973
DNA (921bp) protein (307aa)
Cationic amino acid transporter n=2 Tax=Halococcus hamelinensis RepID=M0LWT9_9EURY
Cationic amino acid transporter {ECO:0000313|EMBL:EMA37936.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
cat3; cationic amino acid transporter
qh_10_scaffold_306_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11061..11417
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NAJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54987.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_10_scaffold_306_12
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11405..12091
DNA (687bp) protein (229aa)
TRK potassium uptake system protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQH2_9EURY
Potassium transporter Trk {ECO:0000313|EMBL:KDS92179.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
TrkA-N domain protein
qh_10_scaffold_306_13
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12150..13703
DNA (1554bp) protein (518aa)
Trk system potassium uptake protein TrkH n=2 Tax=Haloarcula hispanica RepID=G0I025_HALHT
trkH3; trk system potassium uptake protein TrkH
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:AEM59246.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
qh_10_scaffold_306_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14149..15063)
DNA (915bp) protein (305aa)
Serine/threonine protein kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW90_9EURY
Serine/threonine protein kinase {ECO:0000313|EMBL:EMA49871.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
serine/threonine protein phosphatase
qh_10_scaffold_306_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15195..16007
DNA (813bp) protein (271aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZL8_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA49870.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
lipoate-protein ligase
qh_10_scaffold_306_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16067..16672)
DNA (606bp) protein (202aa)
Triacylglycerol lipase (EC:3.1.1.3)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IAH4_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:AHG02748.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
qh_10_scaffold_306_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16732..16941)
DNA (210bp) protein (70aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IAH4_9EURY
Alpha/beta hydrolase {ECO:0000313|EMBL:AHG02748.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Alpha/beta hydrolase fold-3 domain protein
qh_10_scaffold_306_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17121..17945
DNA (825bp) protein (275aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
xthA; DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Probable endonuclease 4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC40_9EURY
qh_10_scaffold_306_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17972..18307)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC63_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43336.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_10_scaffold_306_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18394..19047)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43335.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 20 items

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