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qh_10_scaffold_1225

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_1225_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(55..714)
DNA (660bp) protein (220aa)
AMP-dependent synthetase and ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5K8_HALJB
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADJ15704.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
qh_10_scaffold_1225_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(711..1610)
DNA (900bp) protein (300aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WWW7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY53686.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobiu
AMP-dependent synthetase and ligase
qh_10_scaffold_1225_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1770..2177
DNA (408bp) protein (136aa)
Universal stress protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID1_9EURY
Universal stress protein {ECO:0000313|EMBL:EMA44200.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
UspA domain-containing protein
qh_10_scaffold_1225_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2355..3134)
DNA (780bp) protein (260aa)
Thioredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHM1_9EURY
Thioredoxin {ECO:0000313|EMBL:EMA44199.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
trxA1; thioredoxin
qh_10_scaffold_1225_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3138..3806)
DNA (669bp) protein (223aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRH1_9EURY
livF2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ37795.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qh_10_scaffold_1225_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3803..4048)
DNA (246bp) protein (82aa)
ABC-type branched-chain amino acid transport system, ATP-binding protein I n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWU5_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein I {ECO:0000313|EMBL:EMA49309.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
qh_10_scaffold_1225_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4048..4443)
DNA (396bp) protein (132aa)
ABC-type branched-chain amino acid transport system, ATP-binding protein I n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEL0_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein I {ECO:0000313|EMBL:EMA44197.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
qh_10_scaffold_1225_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4443..5591)
DNA (1149bp) protein (383aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP3_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA44196.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livM1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
qh_10_scaffold_1225_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5769..6740)
DNA (972bp) protein (324aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUK5_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA49311.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
livH1; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
qh_10_scaffold_1225_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7046..8509)
DNA (1464bp) protein (488aa)
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU95_9EURY
Putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EMA49312.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
livJ1; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
qh_10_scaffold_1225_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8755..9615
DNA (861bp) protein (287aa)
Heat shock protein DnaJ domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG86_9EURY
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:EMA43430.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
heat shock protein DnaJ domain-containing protein
qh_10_scaffold_1225_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9713..10426
DNA (714bp) protein (238aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUU0_9EURY
SPP-like hydrolase
qh_10_scaffold_1225_13
unknown

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comp(10702..11220)
DNA (519bp) protein (173aa)

This feature has no annotations

qh_10_scaffold_1225_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11328..12161
DNA (834bp) protein (278aa)
Protein synthesis factor GTP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYA6_9EURY
Protein synthesis factor GTP-binding protein {ECO:0000313|EMBL:EMA49395.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
protein synthesis factor GTP-binding protein
qh_10_scaffold_1225_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12211..12798
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43344.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_10_scaffold_1225_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12782..12997
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49647.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_10_scaffold_1225_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13027..13701)
DNA (675bp) protein (225aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 (EC:3.8.1.2)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCD3_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EMA43427.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
qh_10_scaffold_1225_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13741..14223)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43426.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_10_scaffold_1225_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14220..15152)
DNA (933bp) protein (311aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27)
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW38_9EURY
qh_10_scaffold_1225_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15217..15534)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49961.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_10_scaffold_1225_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16297..17478
DNA (1182bp) protein (394aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQY1_NATM8
livJ1; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36589.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteri
Displaying 21 items

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