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qh_10_scaffold_629

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_629_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1..1815
DNA (1815bp) protein (605aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
qh_10_scaffold_629_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1832..2812)
DNA (981bp) protein (327aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:CBH24880.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Aspartokinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA25_SALRM
dapG; aspartate kinase
qh_10_scaffold_629_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3026..3508
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=Q2S1R1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24886.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_629_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3566..4882)
DNA (1317bp) protein (439aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:CBH24888.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CBH24888.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Deoxyribodipyrimidine photo-lyase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA33_SALRM
phrB; deoxyribodipyrimidine photo-lyase
qh_10_scaffold_629_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4993..6345)
DNA (1353bp) protein (451aa)
gltP; sodium:dicarboxylate symporter
gltP; sodium:dicarboxylate symporter id=24659717 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Proton/glutamate symporter {ECO:0000313|EMBL:ABC45627.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qh_10_scaffold_629_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6694..10005)
DNA (3312bp) protein (1104aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
rpoC; DNA-directed RNA polymerase subunit beta'
qh_10_scaffold_629_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10975..14838)
DNA (3864bp) protein (1288aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=24659720 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
rpoB; DNA-directed RNA polymerase subunit beta
qh_10_scaffold_629_8
unknown

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15100..15231
DNA (132bp) protein (44aa)

This feature has no annotations

qh_10_scaffold_629_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(15344..15727)
DNA (384bp) protein (128aa)
rplL; 50S ribosomal protein L7/L12
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=24659721 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qh_10_scaffold_629_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(15879..16415)
DNA (537bp) protein (179aa)
rplJ; 50S ribosomal protein L10
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=24659722 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_10_scaffold_629_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(16471..17184)
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=2 Tax=Salinibacter ruber RepID=RL1_SALRD
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_10_scaffold_629_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(17311..17751)
DNA (441bp) protein (147aa)
50S ribosomal protein L11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=24659724 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000313|EMBL:CBH24896.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_10_scaffold_629_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17870..18427)
DNA (558bp) protein (186aa)
Transcription termination/antitermination protein NusG n=2 Tax=Salinibacter ruber RepID=D5HA42_SALRM
nusG; transcription termination/antitermination factor NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qh_10_scaffold_629_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(18494..18760)
DNA (267bp) protein (89aa)
Protein translocase subunit SecE n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1P9_SALRD
Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_10_scaffold_629_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(18974..19114)
DNA (141bp) protein (47aa)
tuf; elongation factor Tu
tufA; translation elongation factor Tu (EF-Tu); K02358 elongation factor Tu id=24659727 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
Displaying 15 items

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