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qh_10_scaffold_2019

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_2019_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3..488)
DNA (486bp) protein (162aa)
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein id=24659116 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CBH24279.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_10_scaffold_2019_2
unknown

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749..847
DNA (99bp) protein (33aa)

This feature has no annotations

qh_10_scaffold_2019_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(907..1668)
DNA (762bp) protein (254aa)
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3D0_SALRD
alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP {ECO:0000313|EMBL:ABC44211.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qh_10_scaffold_2019_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1891..2160
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=24659118 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24281.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_2019_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2193..2636)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8C7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24282.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_2019_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2901..3737
DNA (837bp) protein (279aa)
recO; DNA repair protein recO
recO; DNA repair protein recO; K03584 DNA repair protein RecO (recombination protein O) id=24659120 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=761659 species="Bacteria; Bacteroidetes; Bact
qh_10_scaffold_2019_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3857..4507
DNA (651bp) protein (217aa)
lexA2; LexA repressor; K01356 repressor LexA [EC:3.4.21.88] id=24659121 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
LexA repressor {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.- {ECO:0000256|SAAS:SAAS00273293};; EC=3.4.21.88 {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008054}
lexA2; LexA repressor
qh_10_scaffold_2019_8
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4729..5298
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029A426C
hypothetical protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
qh_10_scaffold_2019_9
Arthrobacter aurescens, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5352..5444)
DNA (93bp) protein (31aa)
hypothetical protein n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI0002DC1512
membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:ABM09605.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain
Displaying 9 items

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