ggKbase home page

qh_10_scaffold_150

Search features with annotation key words

Displaying items 1-30 of 37 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_150_1
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..225)
DNA (225bp) protein (75aa)
NADH-quinone oxidoreductase subunit {ECO:0000256|RuleBase:RU003639}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003639};; Flags: Precursor;; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteri
NADH-quinone oxidoreductase subunit n=2 Tax=Nitrosococcus oceani RepID=Q3JDU9_NITOC
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
qh_10_scaffold_150_2
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(322..741)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F440
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV07234.1}; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 /
qh_10_scaffold_150_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(888..2231)
DNA (1344bp) protein (448aa)
Amidohydrolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGG4_RHOMR
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEN73660.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5
qh_10_scaffold_150_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2630..3289
DNA (660bp) protein (220aa)
Menaquinone biosynthesis methyltransferase ubiE {ECO:0000313|EMBL:ABC44296.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABC44296.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
Menaquinone biosynthesis methyltransferase ubiE n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S268_SALRD
menaquinone biosynthesis methyltransferase ubiE
qh_10_scaffold_150_5
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

3749..4684
DNA (936bp) protein (312aa)
2-methylcitrate dehydratase; K01720 2-methylcitrate dehydratase [EC:4.2.1.79] id=14632246 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
2-methylcitrate dehydratase; K01720 2-methylcitrate dehydratase [EC:4.2.1.79] Tax=CSP1_3_Armatimonadetes
putative 2-methylcitrate dehydratase (EC:4.2.1.79)
qh_10_scaffold_150_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4803..5669
DNA (867bp) protein (289aa)
(2R)-phospho-3-sulfolactate synthase ComA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHJ1_RHOMR
(2R)-phospho-3-sulfolactate synthase ComA
(2R)-phospho-3-sulfolactate synthase ComA {ECO:0000313|EMBL:AEN73001.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source=
qh_10_scaffold_150_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5921..6487
DNA (567bp) protein (189aa)
Auracyanin A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S270_SALRD
auracyanin A
Auracyanin A {ECO:0000313|EMBL:ABC43792.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain D
qh_10_scaffold_150_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6571..6855)
DNA (285bp) protein (95aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45831.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659546 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_10_scaffold_150_9
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7055..7849)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VI20_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR69626.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-
hypothetical protein
qh_10_scaffold_150_10
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7906..8610)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C7Z6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEJ69686.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
qh_10_scaffold_150_11
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

8948..11047
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I113_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98950.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
qh_10_scaffold_150_12
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

11230..11700
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I114_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98951.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
qh_10_scaffold_150_13
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12052..13083)
DNA (1032bp) protein (344aa)
sodium:calcium antiporter n=1 Tax=Halomonas smyrnensis RepID=UPI000368CF20
Sodium:calcium antiporter {ECO:0000313|EMBL:KGE78392.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
Na+/Ca2+-exchanging protein
qh_10_scaffold_150_14
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13904..14113
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC42609.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;
qh_10_scaffold_150_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14539..15420
DNA (882bp) protein (294aa)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PANC_SALRD
panC; pantoate--beta-alanine ligase
qh_10_scaffold_150_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15469..15900
DNA (432bp) protein (144aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=2 Tax=Salinibacter ruber RepID=PAND_SALRD
panD; aspartate 1-decarboxylase
qh_10_scaffold_150_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16209..17063
DNA (855bp) protein (285aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
hypothetical protein id=24656764 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
3-hydroxybutyryl-CoA dehydrogenase
qh_10_scaffold_150_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17264..18223)
DNA (960bp) protein (320aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
phoH; PhoH-lihe protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_10_scaffold_150_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18333..19196
DNA (864bp) protein (288aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
qh_10_scaffold_150_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19211..21289)
DNA (2079bp) protein (693aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
peptidyl-prolyl cis-trans isomerase
qh_10_scaffold_150_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21676..22602
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H925_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_150_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22595..23836)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_150_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(24013..24273)
DNA (261bp) protein (87aa)
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=24659369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBH24532.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_10_scaffold_150_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(24517..25020)
DNA (504bp) protein (168aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_10_scaffold_150_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25155..25817
DNA (663bp) protein (221aa)
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=2 Tax=Salinibacter ruber RepID=D5H929_SALRM
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:CBH24534.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
qh_10_scaffold_150_26
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26076..27161
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3284C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ65049.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
qh_10_scaffold_150_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27230..27841
DNA (612bp) protein (204aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CBH24535.1}; EC=1.4.3.5 {ECO:0000313|EMBL:CBH24535.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H930_SALRM
pdxH; pyridoxamine 5'-phosphate oxidase
qh_10_scaffold_150_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27862..28905)
DNA (1044bp) protein (348aa)
Threonine aldolase {ECO:0000313|EMBL:CBH24536.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CBH24536.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Threonine aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H931_SALRM
ltaE; threonine aldolase
qh_10_scaffold_150_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28937..29932)
DNA (996bp) protein (332aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;;
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHP9_RHOM4
monofunctional biosynthetic peptidoglycan transglycosylase
qh_10_scaffold_150_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30036..30638)
DNA (603bp) protein (201aa)
Transcription elongation factor GreA n=2 Tax=Salinibacter ruber RepID=D5H932_SALRM
greA; transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=761659 species="Bacteria
Displaying items 1-30 of 37 in total

View Taxonomy