ggKbase home page

qh_10_scaffold_3853

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_3853_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2..364
DNA (363bp) protein (121aa)
rpsH; 30S ribosomal protein S8
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=24658972 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000313|EMBL:CBH24171.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qh_10_scaffold_3853_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


443..997
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=2 Tax=Salinibacter ruber RepID=RL6_SALRD
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_10_scaffold_3853_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1064..1423
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H818_SALRM
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:CBH24173.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_10_scaffold_3853_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1486..2013
DNA (528bp) protein (176aa)
rpsE; 30S ribosomal protein S5
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=24658975 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
qh_10_scaffold_3853_5
unknown

Not on your lists

comp(2010..2219)
DNA (210bp) protein (70aa)

This feature has no annotations

qh_10_scaffold_3853_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2335..2802
DNA (468bp) protein (156aa)
50S ribosomal protein L15 n=3 Tax=Salinibacter ruber RepID=RL15_SALRD
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_10_scaffold_3853_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2864..4042
DNA (1179bp) protein (393aa)
secY; Preprotein translocase, SecY subunit
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=24658977 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qh_10_scaffold_3853_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4173..5042
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CBH24177.1}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {EC
Methionine aminopeptidase n=2 Tax=Salinibacter ruber RepID=D5H822_SALRM
map; methionine aminopeptidase
qh_10_scaffold_3853_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5042..5263
DNA (222bp) protein (74aa)
infA; translation initiation factor IF-1
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=24658979 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075, ECO:0000313|EMBL:CBH24178.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qh_10_scaffold_3853_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5339..5722
DNA (384bp) protein (128aa)
rpsM; 30S ribosomal protein S13
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=24658980 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315, ECO:0000313|EMBL:CBH24179.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_10_scaffold_3853_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


5781..6176
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H825_SALRM
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBH24180.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_10_scaffold_3853_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


6268..6870
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=2 Tax=Salinibacter ruber RepID=RS4_SALRD
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_10_scaffold_3853_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6995..7252
DNA (258bp) protein (86aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha
Displaying 13 items

View Taxonomy