ggKbase home page

qh_10_scaffold_542

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_542_1
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..397
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CNW5_ROBBH
Sulfatase-modifying factor {ECO:0000313|EMBL:KEQ31406.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter an
hypothetical protein
qh_10_scaffold_542_2
unknown

Not on your lists

394..537
DNA (144bp) protein (48aa)

This feature has no annotations

qh_10_scaffold_542_3
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

524..1930
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WKE3_9FLAO
Contig85, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75747.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
putative protein-transmembrane prediction
qh_10_scaffold_542_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2208..3548
DNA (1341bp) protein (447aa)
Putative dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DED0_SINAD
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA27011.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acid
qh_10_scaffold_542_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3564..5051
DNA (1488bp) protein (496aa)
Sulfatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGT6_9BACT
Sulfatase {ECO:0000313|EMBL:EEF60857.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
sulfatase
qh_10_scaffold_542_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5261..5431
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4U4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23743.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_542_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5590..6423)
DNA (834bp) protein (278aa)
hypothetical protein
hypothetical protein id=24657516 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC44687.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qh_10_scaffold_542_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6570..7253)
DNA (684bp) protein (228aa)
ompA; outer membrane protein A
OmpA family protein id=24657196 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane protein A [Precursor] {ECO:0000313|EMBL:CBH23346.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_10_scaffold_542_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7724..8728
DNA (1005bp) protein (335aa)
graD; glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=24657517 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
graD; glucose-1-phosphate thymidylyltransferase
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:ABC45674.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
qh_10_scaffold_542_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8911..11388
DNA (2478bp) protein (826aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=309807 species="Bacteria; Bacte
MutS2 family protein
MutS2 family protein; K07456 DNA mismatch repair protein MutS2 id=24657518 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_10_scaffold_542_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11556..12521
DNA (966bp) protein (322aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein
D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein id=24657519 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:ABC45940.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qh_10_scaffold_542_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12701..13174
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4T9_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44904.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_542_13
unknown

Not on your lists

comp(14844..15350)
DNA (507bp) protein (169aa)

This feature has no annotations

qh_10_scaffold_542_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15902..17335
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
sensory transduction histidine kinase
sensory transduction histidine kinase id=24657521 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_10_scaffold_542_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17413..17895)
DNA (483bp) protein (161aa)
Caax prenyl protease 1 {ECO:0000313|EMBL:CBH23750.1}; EC=3.4.24.84 {ECO:0000313|EMBL:CBH23750.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
Caax prenyl protease 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6U5_SALRM
htpX; Caax prenyl protease 1
Displaying 15 items

View Taxonomy