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QH_10_Salinibacter_ruber_67_14

In projects: QH_10

Consensus taxonomy: Salinibacter ruber  →  Salinibacter  →  Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Displaying items 1-50 of 228 in total
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contig # features sequence size GC content (%) Cov Coding Density (%) notes
qh_10_scaffold_2912
Species: Salinibacter ruber (52.17%)
23 21468 bp 65.85 11.84 77.74
qh_10_scaffold_1890
Species: Salinibacter ruber (100%)
20 20708 bp 66.78 13.09 86.37
qh_10_scaffold_358
Species: Salinibacter ruber (100%)
20 20253 bp 69.72 13.25 90.56
qh_10_scaffold_870
Species: Salinibacter ruber (95.24%)
21 19009 bp 66.73 12.46 90.37
qh_10_scaffold_621
Species: Salinibacter ruber (89.47%)
19 17729 bp 64.53 12.92 79.70
qh_10_scaffold_302
Species: Salinibacter ruber (93.75%)
16 17638 bp 66.11 12.73 80.64
qh_10_scaffold_1033
Species: Salinibacter ruber (94.74%)
19 16488 bp 67.41 12.77 89.34
qh_10_scaffold_2639
Species: Salinibacter ruber (83.33%)
12 15992 bp 65.32 11.12 93.27
qh_10_scaffold_3758
Species: Salinibacter ruber (100%)
14 15687 bp 66.14 12.51 92.66
qh_10_scaffold_375
Species: Salinibacter ruber (100%)
15 15247 bp 67.61 13.86 81.64
qh_10_scaffold_394
Species: Salinibacter ruber (86.67%)
15 15117 bp 67.50 15.60 84.20
qh_10_scaffold_3101
Species: Salinibacter ruber (93.75%)
16 14914 bp 66.55 12.03 79.23
qh_10_scaffold_2632
Species: Salinibacter ruber (90.91%)
11 14816 bp 65.54 11.99 87.21
qh_10_scaffold_2244
Species: Salinibacter ruber (73.33%)
15 14680 bp 68.94 13.94 86.61
qh_10_scaffold_809
Species: Salinibacter ruber (90.91%)
11 14538 bp 65.99 16.56 86.73
qh_10_scaffold_974
Species: Salinibacter ruber (100%)
14 13955 bp 66.28 14.56 85.54
qh_10_scaffold_1440
Species: Salinibacter ruber (100%)
13 13834 bp 66.47 13.63 90.58
qh_10_scaffold_4007
Species: Salinibacter ruber (100%)
16 13763 bp 65.37 13.80 80.89
qh_10_scaffold_2953
Species: Salinibacter ruber (75%)
12 13551 bp 67.07 13.78 83.24
qh_10_scaffold_612
Species: Salinibacter ruber (100%)
12 13478 bp 65.66 11.98 75.95
qh_10_scaffold_1642
Species: Salinibacter ruber (93.75%)
16 13055 bp 67.71 12.62 82.89
qh_10_scaffold_848
Species: Salinibacter ruber (91.67%)
12 12963 bp 65.25 11.91 71.28
qh_10_scaffold_1696
Species: Salinibacter ruber (86.67%)
15 12840 bp 64.35 13.60 71.29
qh_10_scaffold_444
Species: Salinibacter ruber (75%)
12 12798 bp 66.84 13.49 77.12
qh_10_scaffold_4737
Species: Salinibacter ruber (92.31%)
13 12711 bp 68.41 14.16 84.23
qh_10_scaffold_1344
Species: Salinibacter ruber (91.67%)
12 12099 bp 64.89 13.22 88.30
qh_10_scaffold_1178
Species: Salinibacter ruber (83.33%)
12 11781 bp 63.80 11.95 78.35
qh_10_scaffold_4778
Species: Salinibacter ruber (83.33%)
12 11685 bp 65.41 13.34 86.06
qh_10_scaffold_1322
Species: Salinibacter ruber (77.78%)
9 11653 bp 68.15 13.79 73.47
qh_10_scaffold_3143
Species: Salinibacter ruber (90%)
10 11599 bp 66.82 20.22 74.41
qh_10_scaffold_5383
Species: Salinibacter ruber (81.25%)
16 11536 bp 67.88 13.71 83.43
qh_10_scaffold_1930
Species: Salinibacter ruber (81.82%)
11 11492 bp 63.89 15.52 77.19
qh_10_scaffold_2690
Species: Salinibacter ruber (100%)
11 11322 bp 65.41 12.08 88.77
qh_10_scaffold_861
Species: Salinibacter ruber (91.67%)
12 11063 bp 67.98 14.92 84.74
qh_10_scaffold_973
Species: Salinibacter ruber (100%)
10 10593 bp 68.71 12.28 87.91
qh_10_scaffold_4261
Species: Salinibacter ruber (88.89%)
9 10551 bp 65.16 16.03 69.24
qh_10_scaffold_1855
Species: Salinibacter ruber (100%)
9 10463 bp 67.13 12.96 75.04
qh_10_scaffold_470
Species: Salinibacter ruber (100%)
8 10188 bp 66.31 12.54 86.66
qh_10_scaffold_2195
Species: Salinibacter ruber (85.71%)
7 10183 bp 68.52 15.79 94.19
qh_10_scaffold_4527
Species: Salinibacter ruber (100%)
9 10155 bp 66.37 12.24 82.04
qh_10_scaffold_1106
Species: Salinibacter ruber (100%)
13 10153 bp 67.87 14.21 85.33
qh_10_scaffold_4009
Species: Salinibacter ruber (80%)
10 10087 bp 63.40 11.37 76.88
qh_10_scaffold_3929
Species: Salinibacter ruber (91.67%)
12 10017 bp 68.35 13.04 80.92
qh_10_scaffold_2578
Species: Salinibacter ruber (91.67%)
12 9977 bp 64.73 11.89 84.19
qh_10_scaffold_743
Species: Salinibacter ruber (83.33%)
12 9917 bp 68.02 13.74 83.98
qh_10_scaffold_506
Species: Salinibacter ruber (100%)
10 9872 bp 68.18 14.62 79.95
qh_10_scaffold_624
Species: Salinibacter ruber (100%)
11 9854 bp 65.87 13.19 67.74
qh_10_scaffold_6238
Species: Salinibacter ruber (92.31%)
13 9725 bp 66.60 12.93 87.05
qh_10_scaffold_4604
Species: Salinibacter ruber (100%)
8 9587 bp 65.85 12.35 77.67
qh_10_scaffold_6897
Species: Salinibacter ruber (90.91%)
11 9515 bp 66.52 13.90 75.99
Displaying items 1-50 of 228 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.