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QH_10_Viridiplantae_55_7

QH_10_Eukaryota_55_7
In projects: QH_10

Consensus taxonomy: Eukaryota

Taxonomy override: Eukaryote

Displaying items 851-900 of 970 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_10_scaffold_20803
Species: Morus notabilis (100%)
1 1330 bp 58.35 6.47 81.65
qh_10_scaffold_21117
Species: Eucalyptus grandis (50%)
2 1313 bp 52.93 6.47 98.25
qh_10_scaffold_1905
Phylum: Chlorophyta (50%)
4 9978 bp 53.04 6.47 96.39
qh_10_scaffold_28015
Phylum: Chlorophyta (66.67%)
3 2027 bp 57.67 6.46 79.03
qh_10_scaffold_4982
Domain: Viridiplantae (60%)
5 5229 bp 55.94 6.46 86.98
qh_10_scaffold_1974
Class: rosids (50%)
6 6221 bp 54.96 6.46 67.08
qh_10_scaffold_25619
Phylum: Chlorophyta (66.67%)
3 1116 bp 49.82 6.45 87.37
qh_10_scaffold_7249
Species: Triticum timopheevii (50%)
2 2792 bp 54.33 6.45 89.08
qh_10_scaffold_7350
Species: Chlorella variabilis (66.67%)
3 3382 bp 54.61 6.45 54.11
qh_10_scaffold_25720
Species: Ostreococcus 'lucimarinus' (50%)
2 1723 bp 58.50 6.44 92.28
qh_10_scaffold_8473
Genus: Micromonas (66.67%)
3 5167 bp 52.74 6.43 71.76
qh_10_scaffold_18437
Species: Micromonas sp. RCC299 (50%)
2 1463 bp 58.30 6.43 98.02
qh_10_scaffold_7550
Phylum: Chlorophyta (66.67%)
3 2720 bp 57.87 6.43 74.34
qh_10_scaffold_5612
Species: Populus trichocarpa (100%)
1 3249 bp 56.02 6.43 93.91
qh_10_scaffold_26285
Species: Aegilops tauschii (100%)
1 1091 bp 58.20 6.42 99.82
qh_10_scaffold_25906
Species: Ostreococcus tauri (100%)
1 1106 bp 54.97 6.42 89.78
qh_10_scaffold_11548
Species: Micromonas sp. RCC299 (50%)
2 2055 bp 56.01 6.42 53.72
qh_10_scaffold_18924
Species: Ostreococcus 'lucimarinus' (50%)
2 1435 bp 52.13 6.41 86.34
qh_10_scaffold_11643
Species: Amborella trichopoda (50%)
2 2044 bp 58.61 6.41 79.11
qh_10_scaffold_9305
Domain: Viridiplantae (50%)
4 3811 bp 52.14 6.40 91.55
qh_10_scaffold_19381
Species: Chlamydomonas reinhardtii (50%)
2 1406 bp 60.31 6.40 88.55
qh_10_scaffold_29114
Species: Wollemia nobilis (100%)
1 1002 bp 56.59 6.39 100.00
qh_10_scaffold_20054
Species: Amborella trichopoda (100%)
1 2472 bp 47.98 6.39 48.42
qh_10_scaffold_34050
Species: Micromonas sp. RCC299 (50%)
2 1470 bp 57.69 6.39 100.20
qh_10_scaffold_6065
Species: Physcomitrella patens (50%)
2 3104 bp 56.57 6.38 78.58
qh_10_scaffold_14610
Species: Chlorella variabilis (100%)
1 1740 bp 55.75 6.38 99.83
qh_10_scaffold_32289
Species: Volvox carteri (50%)
2 1491 bp 50.10 6.37 57.75
qh_10_scaffold_9069
Domain: Viridiplantae (50%)
4 3186 bp 58.25 6.37 83.33
qh_10_scaffold_1466
Domain: Viridiplantae (57.14%)
7 6294 bp 56.23 6.37 87.80
qh_10_scaffold_16833
Species: Helicosporidium sp. ATCC 50920 (100%)
1 2407 bp 50.73 6.36 41.63
qh_10_scaffold_9224
Species: Bathycoccus prasinos (50%)
2 3300 bp 57.52 6.36 66.27
qh_10_scaffold_23653
Phylum: Streptophyta (50%)
4 2064 bp 53.49 6.35 84.01
qh_10_scaffold_14318
Species: Tetraselmis sp. GSL018 (50%)
2 1764 bp 56.24 6.35 44.22
qh_10_scaffold_7913
Species: Solanum lycopersicum (100%)
1 2633 bp 55.94 6.34 99.92
qh_10_scaffold_22531
Species: Leersia perrieri (100%)
1 1247 bp 63.75 6.34 61.59
qh_10_scaffold_12315
Domain: Viridiplantae (50%)
6 4568 bp 54.31 6.33 74.74
qh_10_scaffold_10625
Order: Mamiellales (50%)
4 3225 bp 53.52 6.33 77.49
qh_10_scaffold_3407
Order: Mamiellales (50%)
6 5108 bp 56.83 6.32 95.97
qh_10_scaffold_31149
Species: Sorghum bicolor (100%)
1 1742 bp 55.17 6.31 99.89
qh_10_scaffold_4687
Domain: Viridiplantae (60%)
5 3586 bp 50.50 6.30 66.59
qh_10_scaffold_33982
Species: Brassica napus (50%)
2 1428 bp 60.57 6.30 61.97
qh_10_scaffold_18488
Domain: Viridiplantae (50%)
4 1461 bp 56.88 6.30 77.21
qh_10_scaffold_5286
Species: Micromonas sp. RCC299 (50%)
2 3361 bp 55.37 6.28 71.68
qh_10_scaffold_28060
Species: Micromonas pusilla (50%)
2 1640 bp 55.30 6.28 99.88
qh_10_scaffold_14393
Species: Volvox carteri (50%)
2 1758 bp 55.23 6.26 98.12
qh_10_scaffold_26421
Species: Oryza rufipogon (100%)
1 1087 bp 57.87 6.26 85.56
qh_10_scaffold_10658
Species: Selaginella moellendorffii (100%)
1 2172 bp 52.07 6.26 100.00
qh_10_scaffold_32468
Species: Chlamydomonas reinhardtii (50%)
2 1759 bp 59.75 6.25 42.13
qh_10_scaffold_14014
Species: Erythranthe guttata (50%)
2 1791 bp 51.26 6.25 64.32
qh_10_scaffold_2886
Phylum: Chlorophyta (50%)
4 4581 bp 53.13 6.24 68.63
Displaying items 851-900 of 970 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.