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qh_11_scaffold_1434

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_11_scaffold_1434_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..1383
DNA (1383bp) protein (461aa)
ORC1-type DNA replication protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAB6_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
orc1/cdc6 family replication initiation protein
qh_11_scaffold_1434_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1459..2382)
DNA (924bp) protein (308aa)
Signal peptidase I-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME48_9EURY
Signal peptidase I-like protein {ECO:0000313|EMBL:EMA42690.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
signal peptidase
qh_11_scaffold_1434_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2497..4167
DNA (1671bp) protein (557aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1227456 species="Archaea; Eurya
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAW7_9EURY
qh_11_scaffold_1434_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4337..5305
DNA (969bp) protein (323aa)
UvrABC system protein B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAW0_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
qh_11_scaffold_1434_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5316..6383
DNA (1068bp) protein (356aa)
UvrABC system protein B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBH3_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; excinuclease ABC subunit B
qh_11_scaffold_1434_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6266..6943)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_11_scaffold_1434_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6977..7417)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42699.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_11_scaffold_1434_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7566..8435)
DNA (870bp) protein (290aa)
UvrABC system protein C n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEJ0_9EURY
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1227456 species="A
Excinuclease ABC subunit C
qh_11_scaffold_1434_9
unknown

Not on your lists

8534..9256
DNA (723bp) protein (241aa)

This feature has no annotations

qh_11_scaffold_1434_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9263..9697)
DNA (435bp) protein (145aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDD7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA55094.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
transcriptional regulator, IclR family
qh_11_scaffold_1434_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9694..10377)
DNA (684bp) protein (228aa)
IclR-like transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC7_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:EMA42701.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
hypothetical protein
qh_11_scaffold_1434_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10566..11240)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55093.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_11_scaffold_1434_13
unknown

Not on your lists

11390..11962
DNA (573bp) protein (191aa)

This feature has no annotations

qh_11_scaffold_1434_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11839..13995)
DNA (2157bp) protein (719aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1227456 species="Archaea
NAD-dependent DNA ligase (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAV6_9EURY
qh_11_scaffold_1434_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14516..15997)
DNA (1482bp) protein (494aa)
Probable translation initiation factor IF-2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2U9_9EURY
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor eaIF-5B
qh_11_scaffold_1434_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16340..17389)
DNA (1050bp) protein (350aa)
Brp-like protein-like protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQW2_HALVA
Brp-like protein-like protein {ECO:0000313|EMBL:EMA11381.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
blh; Brp-like protein-like
qh_11_scaffold_1434_17
unknown

Not on your lists

17681..17965
DNA (285bp) protein (95aa)

This feature has no annotations

qh_11_scaffold_1434_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18227..19024)
DNA (798bp) protein (266aa)
Cruxrhodopsin n=2 Tax=Haloarcula japonica RepID=Q9YGB7_HALJP
Cruxrhodopsin {ECO:0000313|EMBL:BAA81816.1}; Flags: Precursor;; TaxID=29282 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica.
rhodopsin
qh_11_scaffold_1434_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19204..20817)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000372FD75
PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ACV46814.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qh_11_scaffold_1434_20
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21049..21543)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CN55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23309.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_11_scaffold_1434_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21856..22098
DNA (243bp) protein (81aa)
PRC-barrel domain-containing protein n=2 Tax=Halococcus RepID=M0MEP5_9EURY
PRC-barrel domain-containing protein {ECO:0000313|EMBL:EMA52197.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
PRC-barrel domain-containing protein
qh_11_scaffold_1434_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22098..22556
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43133.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
DNA-binding protein
qh_11_scaffold_1434_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22579..23220)
DNA (642bp) protein (214aa)
Metal-dependent membrane protease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBI0_9EURY
Metal-dependent membrane protease {ECO:0000313|EMBL:EMA43132.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
hypothetical protein
qh_11_scaffold_1434_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23303..24466)
DNA (1164bp) protein (388aa)
Probable glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:000
phosphoglucose isomerase (PGI) (EC:5.3.1.9)
Probable glucose-6-phosphate isomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK9_9EURY
qh_11_scaffold_1434_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24628..25224
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFD3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43130.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_11_scaffold_1434_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25293..25808
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43129.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_11_scaffold_1434_27
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25949..27721
DNA (1773bp) protein (591aa)
AAA ATPase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7U0_9EURY
AAA ATPase {ECO:0000313|EMBL:EMA40684.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
pre-peptidase
qh_11_scaffold_1434_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27676..28458
DNA (783bp) protein (261aa)
Protein-export membrane protein SecF n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N685_9EURY
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
preprotein translocase subunit SecF
qh_11_scaffold_1434_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29016..30050
DNA (1035bp) protein (345aa)
Protein-export membrane protein SecD n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEN5_9EURY
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
secD; preprotein translocase subunit SecD
Displaying 29 items

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