ggKbase home page

qh_11_scaffold_340

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_11_scaffold_340_1
unknown

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)

This feature has no annotations

qh_11_scaffold_340_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(350..922)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNL4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47256.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
cupin domain-containing protein
qh_11_scaffold_340_3
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

945..1406
DNA (462bp) protein (154aa)
MutT/NUDIX family protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3F6_HALMT
mutT; mutT/NUDIX family protein
MutT/NUDIX family protein {ECO:0000313|EMBL:AFK18766.1}; NUDIX hydrolase {ECO:0000313|EMBL:AHZ21865.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
qh_11_scaffold_340_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1499..2302
DNA (804bp) protein (268aa)
pheA; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:CCQ37959.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CCQ37959.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Prephenate dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTY1_NATM8
qh_11_scaffold_340_5
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2378..3232)
DNA (855bp) protein (285aa)
Zinc/iron permease n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA27_9EURY
gufA1; GufA family transport protein (probable substrate zinc)
Zinc/iron permease {ECO:0000313|EMBL:EMA66881.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
qh_11_scaffold_340_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3317..4351)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qh_11_scaffold_340_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4469..5071)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48531.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_11_scaffold_340_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5253..7328)
DNA (2076bp) protein (692aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=348780 species="Archaea;
DNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DNLJ_NATPD
ligA; NAD-dependent DNA ligase LigA
qh_11_scaffold_340_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7383..8486)
DNA (1104bp) protein (368aa)
Aspartate aminotransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KIE8_9EURY
Aspartate aminotransferase {ECO:0000313|EMBL:EMA19585.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica J
aspC2; aspartate aminotransferase
qh_11_scaffold_340_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8804..9994)
DNA (1191bp) protein (397aa)
Major facilitator superfamily transporter n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ8_NATPD
tp20; major facilitator family multidrug efflux transporter tetracyclin resistance protein
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAI48535.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qh_11_scaffold_340_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10093..10794
DNA (702bp) protein (234aa)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI48537.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI48537.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ6_NATPD
hypothetical protein
qh_11_scaffold_340_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10860..12251
DNA (1392bp) protein (464aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Circadian clock protein, KaiC n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FC31_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ56184.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium AT
qh_11_scaffold_340_13
unknown

Not on your lists

comp(12166..13809)
DNA (1644bp) protein (548aa)

This feature has no annotations

qh_11_scaffold_340_14
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13953..14651
DNA (699bp) protein (233aa)
PAS-PAC-PAC sensing histidine kinase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GL79_9EURY
PAS-PAC-PAC sensing histidine kinase {ECO:0000313|EMBL:ELZ72965.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovens
fixL; PAS-PAC-PAC sensing histidine kinase
qh_11_scaffold_340_15
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14792..15064
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LUG0_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56317.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qh_11_scaffold_340_trna_1
unknown

Not on your lists

comp(15342..15415)
DNA (74bp)
transferRNA
qh_11_scaffold_340_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15377..16378)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT67_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48667.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_11_scaffold_340_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16457..16588)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT68_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48666.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_11_scaffold_340_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16895..17245
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ70_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36263.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_11_scaffold_340_19
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(17305..18336)
DNA (1032bp) protein (344aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Fischerella sp. JSC-11 RepID=G6G0H7_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EHC08321.1}; Flags: Fragment;; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
qh_11_scaffold_340_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18491..18739
DNA (249bp) protein (83aa)
Probable sulfite/nitrite reductase (Ferredoxin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKP3_NATM8
nirA2; probable sulfite/nitrite reductase (ferredoxin)
Probable sulfite/nitrite reductase (Ferredoxin) {ECO:0000313|EMBL:CCQ36262.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qh_11_scaffold_340_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18950..20059
DNA (1110bp) protein (370aa)
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) {ECO:0000313|EMBL:CAI48661.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAI48661.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacter
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT73_NATPD
pepB_3; aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) 3
qh_11_scaffold_340_22
unknown

Not on your lists

comp(19903..20541)
DNA (639bp) protein (213aa)

This feature has no annotations

Displaying 23 items

View Taxonomy