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qh_11_scaffold_559

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_11_scaffold_559_1
unknown

Not on your lists

92..667
DNA (576bp) protein (192aa)

This feature has no annotations

qh_11_scaffold_559_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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807..1544
DNA (738bp) protein (246aa)
Oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVV6_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA49887.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
oxidoreductase
qh_11_scaffold_559_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1531..1962)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49888.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_11_scaffold_559_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1959..3140)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC90_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43361.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
beta-lactamase
qh_11_scaffold_559_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3214..3774
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49890.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
transcription anti-termination factor
qh_11_scaffold_559_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3767..4246)
DNA (480bp) protein (160aa)
RNA-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA43363.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
RNA-binding protein
qh_11_scaffold_559_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4746..6023
DNA (1278bp) protein (426aa)
Ribonuclease R n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX43_9EURY
Ribonuclease R {ECO:0000313|EMBL:EMA49893.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ribonuclease R
qh_11_scaffold_559_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6075..6272)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N630_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52145.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qh_11_scaffold_559_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6353..7018)
DNA (666bp) protein (222aa)
PHP domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC0_9EURY
PHP domain-containing protein {ECO:0000313|EMBL:EMA49896.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
PHP domain-containing protein
qh_11_scaffold_559_trna_1
unknown

Not on your lists

comp(7240..7311)
DNA (72bp)
transferRNA
qh_11_scaffold_559_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7322..7939)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43368.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_11_scaffold_559_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8039..8347)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Halococcus RepID=M0MF95_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps10P; 30S ribosomal protein S10P
qh_11_scaffold_559_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8347..9612)
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG18_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qh_11_scaffold_559_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9747..10700)
DNA (954bp) protein (318aa)
Homoserine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZQ0_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:EMA49900.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
homoserine dehydrogenase
qh_11_scaffold_559_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10697..11236)
DNA (540bp) protein (180aa)
Allosteric regulator of homoserine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC5_9EURY
Allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:EMA49901.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
allosteric regulator of homoserine dehydrogenase
qh_11_scaffold_559_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11378..11596
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49902.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_11_scaffold_559_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11879..14071)
DNA (2193bp) protein (731aa)
Elongation factor 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX53_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Haloba
tef2; elongation factor EF-2
qh_11_scaffold_559_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14285..15034
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG25_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_11_scaffold_559_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15132..15752)
DNA (621bp) protein (207aa)
30S ribosomal protein S7 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZQ5_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
qh_11_scaffold_559_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15752..16180)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Halococcus RepID=M0MC79_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps12P; 30S ribosomal protein S12
qh_11_scaffold_559_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16511..16936)
DNA (426bp) protein (142aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
nusA; putative transcription elongation factor NusA protein
qh_11_scaffold_559_21
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16938..19376)
DNA (2439bp) protein (813aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:CCQ32814.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ32814.1};; DNA-directed RNA polymerase subunit A'' protein {ECO:0000313|EMBL:ERJ07195.1}; EC=2.7.7.
DNA-directed RNA polymerase subunit A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP17_9EURY
qh_11_scaffold_559_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19390..19554)
DNA (165bp) protein (55aa)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
DNA-directed RNA polymerase subunit A'' n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFA5_9EURY
qh_11_scaffold_559_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19547..22501)
DNA (2955bp) protein (985aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG30_9EURY
DNA-directed RNA polymerase subunit A'
qh_11_scaffold_559_24
Halococcus sp. 197A, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22526..24220)
DNA (1695bp) protein (565aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1197130 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB'; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase n=2 Tax=Halococcus RepID=M5AAU6_9EURY
qh_11_scaffold_559_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24222..25781)
DNA (1560bp) protein (520aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA49911.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49911.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWD7_9EURY
qh_11_scaffold_559_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25778..26008)
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit H n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC83_9EURY
RNA polymerase Rpb5
Displaying 27 items

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