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qh_11_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_11_scaffold_6_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACY47968.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qh_11_scaffold_6_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(941..1516)
DNA (576bp) protein (192aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG02_RHOM4
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AHG89921.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qh_11_scaffold_6_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1656..2138)
DNA (483bp) protein (161aa)
hypothetical protein
hypothetical protein id=24658226 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative CBS domain protein {ECO:0000313|EMBL:CBH25430.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_11_scaffold_6_4
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(2695..2913)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036B43BC
hypothetical protein; K09165 hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
dodecin
qh_11_scaffold_6_5
unknown

Not on your lists

comp(3106..3432)
DNA (327bp) protein (109aa)

This feature has no annotations

qh_11_scaffold_6_6
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3572..4141)
DNA (570bp) protein (190aa)
ThiJ/PfpI family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWP3_9BACT
ThiJ/PfpI family protein {ECO:0000313|EMBL:ELR73195.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
glutamine amidotransferase
qh_11_scaffold_6_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4499..5242
DNA (744bp) protein (248aa)
Cyclase/dehydrase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRB8_SPILD
cyclase/dehydrase
Cyclase/dehydrase {ECO:0000313|EMBL:ADB39672.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DS
qh_11_scaffold_6_8
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

5279..6448
DNA (1170bp) protein (390aa)
Alcohol dehydrogenase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QM93_9CYAN
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGY58790.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
qh_11_scaffold_6_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6964..7554
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003616AE8
exopolysaccharide synthesis, ExoD Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Exopolysaccharide synthesis ExoD
qh_11_scaffold_6_10
unknown

Not on your lists

comp(7468..7650)
DNA (183bp) protein (61aa)

This feature has no annotations

qh_11_scaffold_6_11
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7729..9555)
DNA (1827bp) protein (609aa)
Two-component system sensor kinase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I3T0_9PSEU
Two-component system sensor kinase {ECO:0000313|EMBL:EOD65134.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancore
two-component system sensor kinase
qh_11_scaffold_6_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10500..11159
DNA (660bp) protein (220aa)
cytochrome C n=1 Tax=Schlesneria paludicola RepID=UPI00029AF142
Chaperone protein HtpG {ECO:0000313|EMBL:EEF61951.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphae
hypothetical protein
qh_11_scaffold_6_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11172..14432
DNA (3261bp) protein (1087aa)
molybdopterin oxidoreductase, iron-sulfur binding subunit; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NR61_MARHT
molybdopterin oxidoreductase, iron-sulfur binding subunit
qh_11_scaffold_6_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

14925..16355
DNA (1431bp) protein (477aa)
polysulphide reductase, NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Polysulfide reductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DF89_SINAD
polysulfide reductase
qh_11_scaffold_6_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16357..16920
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGY2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27911.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
qh_11_scaffold_6_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17073..17669
DNA (597bp) protein (199aa)
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM99_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
qh_11_scaffold_6_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17666..18859
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWM7_NITHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
qh_11_scaffold_6_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

18856..19581
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BR1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81505.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
qh_11_scaffold_6_19
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

19597..20661
DNA (1065bp) protein (355aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiac
Cytochrome c oxidase subunit 2 n=2 Tax=Chloroflexus RepID=A9WF38_CHLAA
cytochrome c oxidase subunit II
qh_11_scaffold_6_20
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20720..22366
DNA (1647bp) protein (549aa)
cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome C oxidase subunit I n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000301F116
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:KIF79936.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspir
qh_11_scaffold_6_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22457..23089
DNA (633bp) protein (211aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] id=12557690 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytochrome C oxidase subunit III
qh_11_scaffold_6_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

23299..23592
DNA (294bp) protein (98aa)
caa(3)-type oxidase subunit IV; K02277 cytochrome c oxidase subunit IV [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Caa(3)-type oxidase, subunit IV n=2 Tax=Chloroflexus RepID=A9WF41_CHLAA
caa(3)-type oxidase subunit IV
qh_11_scaffold_6_23
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23889..24467
DNA (579bp) protein (193aa)
Sodium/hydrogen exchanger n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNB1_BLASD
Sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:CCG02659.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (str
qh_11_scaffold_6_24
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(24475..25089)
DNA (615bp) protein (205aa)
Putative membrane protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A2K6_DEIPD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFZ67432.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilito
qh_11_scaffold_6_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25323..27194)
DNA (1872bp) protein (624aa)
glycosyl hydrolase family protein
glycosyl hydrolase family protein id=24657238 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl hydrolase, family 15 {ECO:0000313|EMBL:ABC43761.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_11_scaffold_6_26
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27445..29415
DNA (1971bp) protein (657aa)
Pyruvate oxidase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JVN1_9BACT
Pyruvate oxidase {ECO:0000313|EMBL:ELR73116.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
thiamine pyrophosphate domain-containing TPP-binding protein
qh_11_scaffold_6_27
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

29546..30655
DNA (1110bp) protein (370aa)
Putative Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:CCF82966.1}; EC=5.1.2.2 {ECO:0000313|EMBL:CCF82966.1};; EC=5.5.1.1 {ECO:0000313|EMBL:CCF82966.1};; TaxID=112989
Putative Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EE54_9CHLR
mandelate racemase/muconate lactonizing protein
qh_11_scaffold_6_28
Chlamydia sp. 'Rubis', Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

30689..31267
DNA (579bp) protein (193aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; Flags: Precursor;; TaxID=1444712 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae;
Superoxide dismutase [Cu-Zn] n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJ38_RHOM4
Superoxide dismutase
qh_11_scaffold_6_29
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31475..31705
DNA (231bp) protein (77aa)
ChaB superfamily n=2 Tax=Nitrosococcus oceani RepID=B6C3R7_9GAMM
cation transport regulato, ChaB
Cation transport regulator ChaB {ECO:0000313|EMBL:KFI20560.1}; TaxID=314279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus
qh_11_scaffold_6_30
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

32267..35458
DNA (3192bp) protein (1064aa)
FAD linked oxidase-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASJ3_RUBXD
FAD linked oxidase-like protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ACZ43027.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Displaying items 1-30 of 44 in total

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