ggKbase home page

qh_11_scaffold_752

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_11_scaffold_752_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
alpha/beta hydrolase
alpha/beta hydrolase id=24658866 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Hydrolase, alpha/beta fold family protein {ECO:0000313|EMBL:ABC43574.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source=
qh_11_scaffold_752_trna_1
unknown

Not on your lists

486..558
DNA (73bp)
transferRNA
qh_11_scaffold_752_2
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

591..797
DNA (207bp) protein (69aa)
id=24658867 bin=Salinibacter_ruber tax=Salinibacter_ruber
id=24658867 bin=Salinibacter_ruber tax=Salinibacter_ruber
qh_11_scaffold_752_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(932..1681)
DNA (750bp) protein (250aa)
DNA polymerase III polC-type {ECO:0000313|EMBL:CBH24064.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24064.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
Exonuclease, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3Z9_SALRD
polC; DNA polymerase III polC-type
qh_11_scaffold_752_4
unknown

Not on your lists

2031..2141
DNA (111bp) protein (37aa)

This feature has no annotations

qh_11_scaffold_752_5
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2213..3634
DNA (1422bp) protein (474aa)
sialate O-acetylesterase (EC:3.1.1.53); K05970 sialate O-acetylesterase [EC:3.1.1.53] Tax=RBG_16_Planctomycetes_64_12_curated
sialate O-acetylesterase (EC:3.1.1.53)
Sialate O-acetylesterase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QX68_PIRSD
qh_11_scaffold_752_6
unknown

Not on your lists

3727..4086
DNA (360bp) protein (120aa)

This feature has no annotations

qh_11_scaffold_752_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3940..4392)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3Z7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46009.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_11_scaffold_752_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4436..5275)
DNA (840bp) protein (280aa)
ParA family protein
ParA family protein id=24658871 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ParA family protein {ECO:0000313|EMBL:ABC43977.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_11_scaffold_752_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5663..6220
DNA (558bp) protein (186aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ABC46312.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ABC46312.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidet
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3Z4_SALRD
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
qh_11_scaffold_752_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6454..6999
DNA (546bp) protein (182aa)
Deoxyguanosine kinase/deoxyadenosine kinase subunit n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3Z3_SALRD
dck; deoxynucleoside kinase
Deoxyguanosine kinase/deoxyadenosine kinase subunit {ECO:0000313|EMBL:ABC45866.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qh_11_scaffold_752_11
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7255..8643
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035FA7AA
Peptidase M23 {ECO:0000313|EMBL:EJF09288.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
peptidase M23
qh_11_scaffold_752_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8954..10819
DNA (1866bp) protein (622aa)
Ubiquinone biosynthesis protein ubiB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCR7_SALRM
ubiB; ubiquinone biosynthesis protein ubiB
Ubiquinone biosynthesis protein ubiB {ECO:0000313|EMBL:CBH25822.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_11_scaffold_752_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10845..12167)
DNA (1323bp) protein (441aa)
Phospholipase, patatin family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ49_SALRD
patatin family phospholipase
Phospholipase, patatin family {ECO:0000313|EMBL:ABC44746.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_11_scaffold_752_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12341..12847)
DNA (507bp) protein (169aa)
phaF; poly(hydroxyalcanoate) granule associated protein
phaF; poly(hydroxyalcanoate) granule associated protein id=24658631 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Poly(Hydroxyalcanoate) granule associated protein {ECO:0000313|EMBL:CBH25820.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qh_11_scaffold_752_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12916..13608)
DNA (693bp) protein (231aa)
phaR; polyhydroxyalkanoate synthesis repressor PhaR
phaR; polyhydroxyalkanoate synthesis repressor PhaR id=24658630 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:CBH25819.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qh_11_scaffold_752_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13758..14546
DNA (789bp) protein (263aa)
Alpha/beta hydrolase fold n=2 Tax=Salinibacter ruber RepID=D5HCR3_SALRM
3-oxoadipate enol-lactone hydrolase
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CBH25818.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_11_scaffold_752_17
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(14637..14918)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LBS6_9CYAN
hypothetical protein Tax=RBG_16_Chloroflexi_52_11_curated
hypothetical protein
qh_11_scaffold_752_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15059..15817)
DNA (759bp) protein (253aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CBH25817.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBH25817.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCR2_SALRM
fabG; 3-oxoacyl-ACP reductase
qh_11_scaffold_752_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15876..17060)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCR1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25816.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_11_scaffold_752_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17154..17729)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ55_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44527.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_11_scaffold_752_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18319..18975)
DNA (657bp) protein (219aa)
HD domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ56_SALRD
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ABC46073.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qh_11_scaffold_752_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19241..19681
DNA (441bp) protein (147aa)
acetyltransferase
acetyltransferase id=24658624 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ABC45899.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qh_11_scaffold_752_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19756..19965)
DNA (210bp) protein (70aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase domain-containing protein; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=24658623 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
peptidyl-prolyl cis-trans isomerase domain-containing protein
qh_11_scaffold_752_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19997..20713)
DNA (717bp) protein (239aa)
peptidyl-prolyl cis-trans isomerase domain-containing protein; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] id=24658623 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase domain-containing protein
qh_11_scaffold_752_trna_2
unknown

Not on your lists

21081..21155
DNA (75bp)
transferRNA
qh_11_scaffold_752_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21333..21752)
DNA (420bp) protein (140aa)
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=24658622 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
clpP; ATP-dependent Clp protease proteolytic subunit
qh_11_scaffold_752_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22177..23562)
DNA (1386bp) protein (462aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000313|EMBL:CBH25811.1}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rul
Trigger factor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCQ6_SALRM
tig; trigger factor Tig
qh_11_scaffold_752_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23848..24537)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ61_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43785.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_11_scaffold_752_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24537..25127)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ61_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43785.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 35 in total

View Taxonomy