ggKbase home page

qh_2_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_232_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..350)
DNA (348bp) protein (116aa)
UPF0179 protein C447_08815 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYW0_9EURY
UPF0179 protein C447_08815 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
hypothetical protein
qh_2_scaffold_232_2
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1526..1780
DNA (255bp) protein (85aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:ELY60470.1}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172, ECO:0000313|EMBL:ELY60470.1}
Adenylosuccinate lyase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFI4_9EURY
adenylosuccinate lyase
qh_2_scaffold_232_3
unknown

Not on your lists

1930..2157
DNA (228bp) protein (76aa)

This feature has no annotations

qh_2_scaffold_232_4
unknown

Not on your lists

comp(2648..3151)
DNA (504bp) protein (168aa)

This feature has no annotations

qh_2_scaffold_232_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3289..3702
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10069.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_2_scaffold_232_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3699..4727
DNA (1029bp) protein (343aa)
Integrase family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP81_9EURY
Integrase family protein {ECO:0000313|EMBL:ELZ24212.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
ssrA; integrase/recombinase
qh_2_scaffold_232_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4839..5429)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034AB0BC
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AHY48234.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
qh_2_scaffold_232_8
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5539..6702
DNA (1164bp) protein (388aa)
Signal transduction histidine kinase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I7V4_HALRX
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGB14858.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strai
qh_2_scaffold_232_9
BJP_IG2102_Methanoregula_52_95, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7229..8011)
DNA (783bp) protein (261aa)
endonuclease Tax=BJP_IG2102_Methanoregula_52_95
qh_2_scaffold_232_10
unknown

Not on your lists

comp(8146..8481)
DNA (336bp) protein (112aa)

This feature has no annotations

qh_2_scaffold_232_11
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8603..9991
DNA (1389bp) protein (463aa)
DNA methylase (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1R0P0_9EURY
DNA methylase {ECO:0000313|EMBL:ERH11842.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
type II restriction-modification system sequence-specific DNA-methyltransferase
qh_2_scaffold_232_trna_2
unknown

Not on your lists

comp(10240..10314)
DNA (75bp)
transferRNA
qh_2_scaffold_232_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10455..11198
DNA (744bp) protein (248aa)
SIMPL domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU02_NATPD
hypothetical protein
SIMPL domain protein {ECO:0000313|EMBL:CAI48381.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
qh_2_scaffold_232_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11222..13189)
DNA (1968bp) protein (656aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KR82_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA22709.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyt
3-hydroxyacyl-CoA dehydrogenase
qh_2_scaffold_232_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13308..14468
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNY5_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ24975.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
acyl-CoA dehydrogenase
qh_2_scaffold_232_15
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14633..15703
DNA (1071bp) protein (357aa)
Cysteine desulfurase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KNL0_HALAR
Cysteine desulfurase {ECO:0000313|EMBL:EMA22488.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 1
cysteine desulfurase
qh_2_scaffold_232_16
unknown

Not on your lists

15758..16267
DNA (510bp) protein (170aa)

This feature has no annotations

qh_2_scaffold_232_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16333..16599
DNA (267bp) protein (89aa)
oxidoreductase id=24648827 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative oxidoreductase {ECO:0000313|EMBL:ERH09959.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
oxidoreductase
qh_2_scaffold_232_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16679..17332
DNA (654bp) protein (218aa)
oxidoreductase id=24645741 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative oxidoreductase {ECO:0000313|EMBL:ERH09959.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
aldo/keto reductase
qh_2_scaffold_232_19
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17329..18381
DNA (1053bp) protein (351aa)
Chloromuconate cycloisomerase n=2 Tax=Haloarcula hispanica RepID=G0HUZ6_HALHT
ykfB1; chloromuconate cycloisomerase
Chloromuconate cycloisomerase {ECO:0000313|EMBL:AEM56303.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (
qh_2_scaffold_232_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18439..19260
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 PF46_9EURY">RepID=U1PF46_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_2_scaffold_232_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19365..19898)
DNA (534bp) protein (178aa)
acetyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000365215F
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV48886.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
qh_2_scaffold_232_22
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20010..20261)
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V5T4_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45118.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_2_scaffold_232_23
unknown

Not on your lists

20474..20584
DNA (111bp) protein (37aa)

This feature has no annotations

qh_2_scaffold_232_24
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20603..21799)
DNA (1197bp) protein (399aa)
Transcriptional regulator with HTH domain and aminotransferase domain n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IDZ7_HALRX
transcriptional regulator with HTH domain and aminotransferase domain
Transcriptional regulator with HTH domain and aminotransferase domain {ECO:0000313|EMBL:AGB16436.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.
qh_2_scaffold_232_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22273..23445
DNA (1173bp) protein (391aa)
Cell division protein FtsZ n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYJ5_HALMD
Tubulin/FtsZ GTPase
Cell division protein FtsZ {ECO:0000256|RuleBase:RU003360}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
qh_2_scaffold_232_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23582..23833
DNA (252bp) protein (84aa)
Translation initiation factor 1A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGU0_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
tif1A2; translation initiation factor aIF-1A
qh_2_scaffold_232_27
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24074..24268)
DNA (195bp) protein (65aa)
Cold-shock DNA-binding domain-containing protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XCL6_9EURY
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:ELY59382.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natro
cold-shock DNA-binding domain-containing protein
qh_2_scaffold_232_28
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24348..24788)
DNA (441bp) protein (147aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B8Y8_9EURY
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ELZ06763.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 130
putative NADPH-quinone reductase (modulator of drug activity B)
qh_2_scaffold_232_29
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24815..26152)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BQU0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ13371.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
Displaying items 1-30 of 51 in total

View Taxonomy