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qh_2_scaffold_2425

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_2425_1
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..644)
DNA (642bp) protein (214aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PNI6_9EURY
UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:EMA71069.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis
qh_2_scaffold_2425_2

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comp(755..1687)
DNA (933bp) protein (311aa)
Glycosyl transferase family 2 n=1 Tax=halophilic archaeon DL31 RepID=G2MJX7_9ARCH
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEN05330.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_2_scaffold_2425_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1916..2566)
DNA (651bp) protein (217aa)
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1033806 species="Archaea; Euryarchaeota; H
Ribonuclease HII n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E1L2_9EURY
qh_2_scaffold_2425_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2675..4471)
DNA (1797bp) protein (599aa)
pseudouridylate synthase; K07583 tRNA pseudouridine synthase 10 [EC:5.4.99.-] id=24645927 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=1085028
pseudouridylate synthase
qh_2_scaffold_2425_5
unknown

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4793..5140
DNA (348bp) protein (116aa)

This feature has no annotations

qh_2_scaffold_2425_6
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5229..6098
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KRL4_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA22385.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qh_2_scaffold_2425_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6216..7082
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23463.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_2_scaffold_2425_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7140..8333
DNA (1194bp) protein (398aa)
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QMM2_9EURY
Nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:ERH08278.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
nucleotidyl transferase
qh_2_scaffold_2425_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8333..8941
DNA (609bp) protein (203aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glmS2; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KZX7_9EURY
qh_2_scaffold_2425_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8938..9879
DNA (942bp) protein (314aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] id=24644052 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
glucosamine/fructose-6-phosphate aminotransferase
qh_2_scaffold_2425_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10033..11136)
DNA (1104bp) protein (368aa)
Deoxyhypusine synthase {ECO:0000313|EMBL:ELZ24850.1}; EC=2.5.1.46 {ECO:0000313|EMBL:ELZ24850.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosim
Deoxyhypusine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNK6_9EURY
deoxyhypusine synthase
qh_2_scaffold_2425_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11186..12046)
DNA (861bp) protein (287aa)
Uncharacterized protein id=24645612 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09833.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_2_scaffold_2425_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12147..12341
DNA (195bp) protein (65aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] id=24644734 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1085028 species="Archaea; Euryarchaeo
thymidylate kinase
Displaying 13 items

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