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qh_2_scaffold_1939

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_1939_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..352)
DNA (351bp) protein (117aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Putative tRNA(Met) cytidine acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL4_NATPD
hypothetical protein
qh_2_scaffold_1939_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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987..1280
DNA (294bp) protein (98aa)
50S ribosomal protein L21e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL21_NATPD
rpl21R; 50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000255|HAMAP-Rule:MF_00369}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
qh_2_scaffold_1939_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1277..1633
DNA (357bp) protein (119aa)
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:CAI49932.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI49932.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit F n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL8_NATPD
qh_2_scaffold_1939_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1777..2352
DNA (576bp) protein (192aa)
Putative tRNA-specific adenosine deaminase {ECO:0000313|EMBL:CAI49931.1}; EC=3.5.4.- {ECO:0000313|EMBL:CAI49931.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Putative tRNA-specific adenosine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL9_NATPD
hypothetical protein
qh_2_scaffold_1939_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2416..3243
DNA (828bp) protein (276aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RSMA_NATPD
ksgA; dimethyladenosine transferase
qh_2_scaffold_1939_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3274..4854
DNA (1581bp) protein (527aa)
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM1_NATPD
msc_5; mechanosensitive channel
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI49929.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qh_2_scaffold_1939_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4851..5429
DNA (579bp) protein (193aa)
Protein N5-glutamine methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM2_NATPD
hemK; protein methyltransferase
Protein N5-glutamine methyltransferase {ECO:0000313|EMBL:CAI49928.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomona
qh_2_scaffold_1939_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5924..6397
DNA (474bp) protein (158aa)
metE_2; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Methionine synthase II) {ECO:0000313|EMBL:CAI49927.1}; EC=2.1.1.14 {ECO:0000313|EMBL:CAI49927.1};; TaxID=348780 species="Archae
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Methionine synthase II) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM3_NATPD
qh_2_scaffold_1939_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6394..7455
DNA (1062bp) protein (354aa)
metE_1; methionine synthase (EC:2.1.1.14)
Methionine synthase {ECO:0000256|HAMAP-Rule:MF_00288}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00288};; Homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00288}; TaxID=348780 species="Archaea; E
Probable methylcobalamin:homocysteine methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM4_NATPD
qh_2_scaffold_1939_10
unknown

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7542..7763
DNA (222bp) protein (74aa)

This feature has no annotations

qh_2_scaffold_1939_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7828..8289)
DNA (462bp) protein (154aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=NDK_NATPD
qh_2_scaffold_1939_12
Cricetulus griseus, Cricetulus, Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(8289..8549)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Cricetulus griseus RepID=G3HBK5_CRIGR
Putative uncharacterized protein {ECO:0000313|EMBL:EGW11006.1}; TaxID=10029 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rod
hypothetical protein
Displaying 12 items

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