ggKbase home page

qh_2_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_6_1
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(460..999)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XKN8_9CHRO
protein of unknown function DUF1822
Uncharacterized protein {ECO:0000313|EMBL:AFZ32646.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
qh_2_scaffold_6_2
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1335..1622)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U7M6_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKD38179.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
hypothetical protein
qh_2_scaffold_6_3
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1784..2266)
DNA (483bp) protein (161aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XJ54_9CHRO
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFZ32645.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. P
qh_2_scaffold_6_4
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2630..3967
DNA (1338bp) protein (446aa)
Putative efflux protein, MATE family n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TJ70_9CYAN
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:AFY82600.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata
qh_2_scaffold_6_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

4142..5092
DNA (951bp) protein (317aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T345_9CYAN
4-hydroxybenzoate polyprenyltransferase rbh
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AFY77282.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="P
qh_2_scaffold_6_trna_2
unknown

Not on your lists

comp(5130..5201)
DNA (72bp)
transferRNA
qh_2_scaffold_6_trna_1
unknown

Not on your lists

comp(5245..5327)
DNA (83bp)
transferRNA
qh_2_scaffold_6_6
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5484..6620)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YD98_HALP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ44824.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain
qh_2_scaffold_6_7
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(6806..7033)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DGU0_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ35602.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
qh_2_scaffold_6_8
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7056..7895)
DNA (840bp) protein (280aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Nostoc sp. PCC 7107 RepID=K9Q529_9NOSO
qh_2_scaffold_6_9
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7927..8193
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000347949E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK73494.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synec
qh_2_scaffold_6_10
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8276..10555)
DNA (2280bp) protein (760aa)
Kef-type K+ transport system, membrane component n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WJR1_9CYAN
Kef-type K+ transport system membrane protein
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:AFZ20051.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;
qh_2_scaffold_6_11
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10893..11894
DNA (1002bp) protein (334aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9Z055_DACSA
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFZ52112.1}; Flags: Precursor;; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" sou
qh_2_scaffold_6_12
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

12073..12621
DNA (549bp) protein (183aa)
Late competence development protein ComFB n=2 Tax=Chlorogloeopsis RepID=UPI000309DF19
late competence development protein ComFB
Late competence development protein ComFB {ECO:0000313|EMBL:AFY56981.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
qh_2_scaffold_6_13
Rubidibacter lacunae, Rubidibacter, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(12774..14039)
DNA (1266bp) protein (422aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DER5_9CHRO
qh_2_scaffold_6_14
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(14271..15077)
DNA (807bp) protein (269aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T643_9CYAN
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:AFY78332.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qh_2_scaffold_6_15
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


comp(15110..16126)
DNA (1017bp) protein (339aa)
RNA binding S1 domain protein n=2 Tax=Cyanothece RepID=B7JX65_CYAP8
30S ribosomal protein S1
RNA binding S1 domain protein {ECO:0000313|EMBL:ACK67053.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801)
qh_2_scaffold_6_16
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16510..17052)
DNA (543bp) protein (181aa)
Transcriptional repressor NrdR n=2 Tax=Cyanothece RepID=NRDR_CYAP8
nrdR; transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000255|HAMAP-Rule:MF_00440}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8
qh_2_scaffold_6_17
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17297..17572)
DNA (276bp) protein (92aa)
Photosystem II reaction center protein T n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YBK1_HALP7
photosystem II protein PsbT
Photosystem II reaction center protein T {ECO:0000256|HAMAP-Rule:MF_00808}; Short=PSII-T {ECO:0000256|HAMAP-Rule:MF_00808};; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chrooc
qh_2_scaffold_6_18
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17599..19137)
DNA (1539bp) protein (513aa)
Photosystem II chlorophyll-binding protein CP47 n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GMA2_9CYAN
photosystem II chlorophyll-binding protein CP47
Photosystem II CP47 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01495}; PSII 47 kDa protein {ECO:0000256|HAMAP-Rule:MF_01495}; Protein CP-47 {ECO:0000256|HAMAP-Rule:MF_01495}; TaxID=13035 speci
qh_2_scaffold_6_19
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(19501..20865)
DNA (1365bp) protein (455aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YHI6_HALP7
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFZ45850.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece
qh_2_scaffold_6_20
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20912..21229)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WMY7_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ21775.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
qh_2_scaffold_6_21
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

21385..23169
DNA (1785bp) protein (595aa)
Serine/threonine protein kinase n=1 Tax=Arthrospira maxima CS-328 RepID=B5VUJ2_ARTMA
Serine/threonine protein kinase {ECO:0000313|EMBL:KIJ74588.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.
serine/threonine protein kinase
qh_2_scaffold_6_22
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23329..25260
DNA (1932bp) protein (644aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YUL7_DACSA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=13035 species="Bacteri
glucose-inhibited division protein A
qh_2_scaffold_6_23
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25554..26135
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QDX8_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ERT06094.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
hypothetical protein
qh_2_scaffold_6_24
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26165..26401)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XIU0_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ32443.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
qh_2_scaffold_6_25
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26679..27686)
DNA (1008bp) protein (336aa)
Phosphoribulokinase {ECO:0000256|RuleBase:RU004082}; EC=2.7.1.19 {ECO:0000256|RuleBase:RU004082};; TaxID=13035 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.
Phosphoribulokinase n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YU48_DACSA
uridine kinase
qh_2_scaffold_6_26
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28233..29459
DNA (1227bp) protein (409aa)
Ferredoxin--NADP reductase {ECO:0000256|RuleBase:RU004465}; EC=1.18.1.2 {ECO:0000256|RuleBase:RU004465};; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chrooc
Ferredoxin--NADP reductase n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y8M7_HALP7
oxidoreductase FAD/NAD(P)-binding domain-containing protein
qh_2_scaffold_6_27
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

29769..31667
DNA (1899bp) protein (633aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatorio
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9Y780_HALP7
qh_2_scaffold_6_28
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

31854..32459
DNA (606bp) protein (202aa)
4-hydroxybenzoate synthetase (EC:4.1.3.40)
4-hydroxybenzoate synthetase (Chorismate lyase) {ECO:0000313|EMBL:AFZ18637.1}; EC=4.1.3.40 {ECO:0000313|EMBL:AFZ18637.1};; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillator
4-hydroxybenzoate synthetase (Chorismate lyase) n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WGL0_9CYAN
Displaying items 1-30 of 38 in total

View Taxonomy