ggKbase home page

qh_2_scaffold_1210

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_1210_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..111
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA52995.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qh_2_scaffold_1210_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(360..644)
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZV7_9EURY
transcription termination factor Tfs
qh_2_scaffold_1210_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(966..1568)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4B6_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13478.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_2_scaffold_1210_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1764..2345
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43875.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
BioY protein
qh_2_scaffold_1210_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2342..2962
DNA (621bp) protein (207aa)
Putative cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDQ1_9EURY
Putative cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA43876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
bioM; ABC-type transport system ATP-binding protein (probable substrate biotin)
qh_2_scaffold_1210_6

Not on your lists

2959..3117
DNA (159bp) protein (53aa)
ABC-type cobalt transport system, ATPase component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XS57_9ARCH
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:ESS02901.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC transporter
qh_2_scaffold_1210_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3236..3943
DNA (708bp) protein (236aa)
Cobalt transporter n=3 Tax=Halococcus hamelinensis RepID=M0M6S9_9EURY
Cobalt transporter {ECO:0000313|EMBL:EMA41497.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
bioN; ABC-type transport system permease protein (probable substrate biotin)
qh_2_scaffold_1210_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4096..6291
DNA (2196bp) protein (732aa)
Fe-S oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDZ8_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:EMA54910.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
Fe-S oxidoreductase
qh_2_scaffold_1210_9
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6244..8421)
DNA (2178bp) protein (726aa)
beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase {ECO:0000313|EMBL:AEH37020.1}; EC=3.2.1.21 {ECO:0000313|EMBL:AEH37020.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source
Beta-glucosidase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DAS8_HALXS
qh_2_scaffold_1210_10
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8581..9537
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PTC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA72085.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
putative membrane-associated, metal-dependent hydrolase
qh_2_scaffold_1210_11
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9592..10542
DNA (951bp) protein (317aa)
Glycosyl transferase n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A1Z1_9PROT
Glycosyl transferase {ECO:0000313|EMBL:EHI48726.1}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
glycosyl transferase
qh_2_scaffold_1210_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10663..11709
DNA (1047bp) protein (349aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1};; TaxID=358396 species="Arc
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LQF4_9EURY
qh_2_scaffold_1210_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12116..12466
DNA (351bp) protein (117aa)
Ammonium transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6R9_9EURY
Ammonium transporter {ECO:0000313|EMBL:EMA41492.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.
amt2; ammonium transporter
qh_2_scaffold_1210_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12492..12806
DNA (315bp) protein (105aa)
Rh family protein/ammonium transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NET8_9EURY
Rh family protein/ammonium transporter {ECO:0000313|EMBL:EMA55210.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
amt1; ammonium transporter
Displaying 14 items

View Taxonomy