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qh_2_scaffold_1954

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_1954_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..153)
DNA (153bp) protein (51aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1X7_9EURY
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:EMA51498.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
qh_2_scaffold_1954_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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274..1143
DNA (870bp) protein (290aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1227455 species="Archaea; Eurya
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM2_9EURY
qh_2_scaffold_1954_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1169..2089
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51500.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_1954_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2038..2871
DNA (834bp) protein (278aa)
branched-chain amino acid aminotransferase n=1 Tax=Halomicrobium katesii RepID=UPI000379DA42
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
qh_2_scaffold_1954_5
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2990..3364)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YBH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY70981.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qh_2_scaffold_1954_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3840..4292
DNA (453bp) protein (151aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYS4_9EURY
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EJN60587.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
Rieske iron-sulfur domain protein
qh_2_scaffold_1954_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4325..4618)
DNA (294bp) protein (98aa)
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0ML90_HALMO
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:EMA46431.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon
qh_2_scaffold_1954_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4812..5777
DNA (966bp) protein (322aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:CCQ34564.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CCQ34564.1};; Glucose-1-phosphate thymidylyltransferase protein {ECO:0000313|EMBL:ERJ06395.1}; EC
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PLZ5_9EURY
qh_2_scaffold_1954_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5997..6404)
DNA (408bp) protein (136aa)
N-6 DNA Methylase/Eco57I restriction endonuclease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJB3_9EURY
N-6 DNA Methylase/Eco57I restriction endonuclease {ECO:0000313|EMBL:ESP88009.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;"
putative restriction/modification enzyme
Displaying 9 items

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