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qh_2_scaffold_302

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_302_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..178
DNA (177bp) protein (59aa)
Integrase catalytic region n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0J0_HALTV
integrase
Integrase catalytic region {ECO:0000313|EMBL:ADB62887.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (st
qh_2_scaffold_302_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(258..986)
DNA (729bp) protein (243aa)
hts; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=2 Tax=Haloferax RepID=M0H3U5_HALL2
Thymidylate synthase {ECO:0000313|EMBL:CQR49741.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
qh_2_scaffold_302_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1249..2136
DNA (888bp) protein (296aa)
AAA-4 family protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8S4_MESCW
ATPase AAA
AAA-4 family protein {ECO:0000313|EMBL:ADV12972.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri
qh_2_scaffold_302_4
unknown

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comp(2149..2310)
DNA (162bp) protein (54aa)

This feature has no annotations

qh_2_scaffold_302_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2317..2694)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRB2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48267.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
qh_2_scaffold_302_6
unknown

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comp(2691..2861)
DNA (171bp) protein (57aa)

This feature has no annotations

qh_2_scaffold_302_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2963..3436)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MY01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50193.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_302_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3742..4479
DNA (738bp) protein (246aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSG3_9EURY
qh_2_scaffold_302_9
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

Not on your lists

comp(4538..5422)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1J5I6_STRMM
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR008888-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaenii
putative lipoprotein
qh_2_scaffold_302_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5739..6047
DNA (309bp) protein (103aa)
DoxX protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUF0_HALMO
DoxX protein {ECO:0000313|EMBL:EMA49256.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hypothetical protein
qh_2_scaffold_302_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6253..6909
DNA (657bp) protein (219aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRD7_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EMA36162.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
Glyoxalase/bleomycin resistance protein/dioxygenase
qh_2_scaffold_302_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7080..8165
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0U5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47077.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_2_scaffold_302_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8245..8838
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49202.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_2_scaffold_302_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8856..9725)
DNA (870bp) protein (290aa)
Thiamine-monophosphate kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCF8_9EURY
Thiamine-monophosphate kinase {ECO:0000313|EMBL:EMA55652.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
thiamine-monophosphate kinase
qh_2_scaffold_302_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9866..11140)
DNA (1275bp) protein (425aa)
Aldehyde dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VV60_9EURY
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AGN00156.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;
qh_2_scaffold_302_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11599..12627
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8Q4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40790.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_2_scaffold_302_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12782..13237
DNA (456bp) protein (152aa)
30S ribosomal protein S19e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRL1_NATPD
rps19R; 30S ribosomal protein S19e
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
qh_2_scaffold_302_18
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13321..14277
DNA (957bp) protein (319aa)
Phenazine biosynthesis protein PhzF family n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQT2_9EURY
Phenazine biosynthesis protein {ECO:0000313|EMBL:KDE56921.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
phzF; putative phenazine biosynthesis protein
qh_2_scaffold_302_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14378..14740
DNA (363bp) protein (121aa)
DNA-binding protein C449_14252 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBJ3_9EURY
DNA-binding protein C449_14252 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
hypothetical protein
qh_2_scaffold_302_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14909..15580
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0K3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39206.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_2_scaffold_302_21
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15750..16556
DNA (807bp) protein (269aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=795797 species="Archaea; Eur
Histidine--tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8Q7_HALJB
qh_2_scaffold_302_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16520..17008
DNA (489bp) protein (163aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1132509 species="Archaea; Eu
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV72_9EURY
Suspect SCG annotation. See neighboring gene [qh_2_scaffold_302_21].
qh_2_scaffold_302_23
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17010..17267
DNA (258bp) protein (86aa)
LD-carboxypeptidase id=24616751 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
LD-carboxypeptidase {ECO:0000313|EMBL:ESP87338.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
LD-carboxypeptidase
qh_2_scaffold_302_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17273..18106
DNA (834bp) protein (278aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZZ7_9EURY
Pseudouridine synthase I, TruA, alpha/beta domain protein
qh_2_scaffold_302_25
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18203..19972)
DNA (1770bp) protein (590aa)
Peptidase M28 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D5P8_HALXS
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AEH36470.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM
qh_2_scaffold_302_26
unknown

Not on your lists

comp(20115..20519)
DNA (405bp) protein (135aa)

This feature has no annotations

qh_2_scaffold_302_27
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20690..22480
DNA (1791bp) protein (597aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHY5_9EURY
Oligoendopeptidase F {ECO:0000313|EMBL:EMA28874.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;
qh_2_scaffold_302_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22517..23737
DNA (1221bp) protein (407aa)
Proteasome-activating nucleotidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEP7_9EURY
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
peptidase
Displaying 28 items

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