ggKbase home page

qh_2_scaffold_384

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_384_16S_1
unknown

Not on your lists

comp(1..522)
DNA (522bp)
qh_2_scaffold_384_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1155..1466)
DNA (312bp) protein (104aa)
Non-histone chromosomal MC1 family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7E4_9EURY
nonhistone chromosomal protein
Non-histone chromosomal MC1 family protein {ECO:0000313|EMBL:EMA53029.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
qh_2_scaffold_384_2
unknown

Not on your lists

comp(1613..1942)
DNA (330bp) protein (110aa)

This feature has no annotations

qh_2_scaffold_384_3
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2081..3142
DNA (1062bp) protein (354aa)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:ELZ38059.1}; EC=1.3.98.1 {ECO:0000313|EMBL:ELZ38059.1};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
pyrD; dihydroorotate dehydrogenase (quinone) (EC:1.3.5.2)
dihydroorotate dehydrogenase n=1 Tax=Halorubrum sp. T3 RepID=UPI00037EFE40
qh_2_scaffold_384_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3305..4453
DNA (1149bp) protein (383aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:ELZ29817.1}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D545_9EURY
qh_2_scaffold_384_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4590..4985)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MHN6_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA43930.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_2_scaffold_384_trna_1
unknown

Not on your lists

comp(6181..6261)
DNA (81bp)
transferRNA
qh_2_scaffold_384_6
unknown

Not on your lists

comp(6321..6476)
DNA (156bp) protein (52aa)

This feature has no annotations

qh_2_scaffold_384_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6540..6944)
DNA (405bp) protein (135aa)
Endoribonuclease L-PSP n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X4Q9_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELY56774.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
endoribonuclease L-PSP
qh_2_scaffold_384_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7084..8292)
DNA (1209bp) protein (403aa)
ilvA, tdcB; threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:CCQ35420.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CCQ35420.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Threonine ammonia-lyase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNE3_NATM8
qh_2_scaffold_384_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8551..8967)
DNA (417bp) protein (139aa)
AIG2 family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN44_9EURY
AIG2 family protein {ECO:0000313|EMBL:EMA45870.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
AIG2 family protein
qh_2_scaffold_384_10
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9266..10933
DNA (1668bp) protein (556aa)
Thermosome n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYS4_HALTV
thermosome subunit
Thermosome subunit {ECO:0000313|EMBL:AHG00197.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
qh_2_scaffold_384_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11092..11319)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA22460.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qh_2_scaffold_384_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11316..12020)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N667_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52185.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_384_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12068..13000)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49305.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_2_scaffold_384_14
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14122..14358
DNA (237bp) protein (79aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935, ECO:0000313|EMBL:CAP14650.1}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935, ECO:0000313|EMBL:CAP1
Alanine dehydrogenase n=2 Tax=Halobacterium salinarum RepID=B0R7D1_HALS3
qh_2_scaffold_384_15
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14355..15077
DNA (723bp) protein (241aa)
l-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=469382 species="Archaea; Euryarchaeota; Ha
Alanine dehydrogenase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTY0_HALBP
qh_2_scaffold_384_16
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15398..18406)
DNA (3009bp) protein (1003aa)
leucyl-tRNA synthetase (EC:6.1.1.9)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:ELZ58188.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1227
Leucine--tRNA ligase n=3 Tax=Haloferax RepID=M0FFS4_9EURY
qh_2_scaffold_384_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18615..19016)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIS2_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB30231.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellir
qh_2_scaffold_384_18
unknown

Not on your lists

comp(19196..19408)
DNA (213bp) protein (71aa)

This feature has no annotations

qh_2_scaffold_384_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19476..19616
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA40141.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qh_2_scaffold_384_20
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19674..20093)
DNA (420bp) protein (140aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AII5_NATA1
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ELY98171.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
qh_2_scaffold_384_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20208..20648)
DNA (441bp) protein (147aa)
Hsp20-type chaperone n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDB8_9EURY
Hsp20-type chaperone {ECO:0000313|EMBL:EMA55533.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 898
molecular chaperone
qh_2_scaffold_384_22
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20698..21516)
DNA (819bp) protein (273aa)
pheA2; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WMS7_9EURY
Prephenate dehydratase {ECO:0000313|EMBL:ELY50774.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 1063
qh_2_scaffold_384_23
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21667..22029)
DNA (363bp) protein (121aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNF4_NATP1
acyl-CoA thioester hydrolase, YbgC/YbaW family
Acyl-CoA thioester hydrolase, YbgC/YbaW family {ECO:0000313|EMBL:AGB32779.1}; Thioesterase superfamily protein {ECO:0000313|EMBL:ELY75783.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria
qh_2_scaffold_384_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22186..23037)
DNA (852bp) protein (284aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCS5_9EURY
qh_2_scaffold_384_25
unknown

Not on your lists

23213..23707
DNA (495bp) protein (165aa)

This feature has no annotations

qh_2_scaffold_384_26
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23754..24359)
DNA (606bp) protein (202aa)
Short-chain family oxidoreductase n=2 Tax=Haloferax RepID=M0GXZ4_HALL2
Short-chain family oxidoreductase {ECO:0000313|EMBL:ELZ86878.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus
sdr; short chain dehydrogenase
qh_2_scaffold_384_27
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24504..27167)
DNA (2664bp) protein (888aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N656_9EURY
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:EMA53013.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
qh_2_scaffold_384_28
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27172..28281)
DNA (1110bp) protein (370aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit {ECO:0000313|EMBL:AEH35755.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AEH35755.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobac
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6T8_HALXS
Displaying items 1-30 of 33 in total

View Taxonomy