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qh_2_scaffold_1204

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_1204_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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259..1095
DNA (837bp) protein (279aa)
DNA-binding protein
DNA-binding protein id=24657548 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative DNA-binding protein {ECO:0000313|EMBL:ABC45640.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_2_scaffold_1204_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1147..2097
DNA (951bp) protein (317aa)
ldh; L-lactate dehydrogenase; K00016 L-lactate dehydrogenase [EC:1.1.1.27] id=24657549 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:CBH23778.1}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488, ECO:0000313|EMBL:C
L-lactate dehydrogenase
qh_2_scaffold_1204_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2257..2619
DNA (363bp) protein (121aa)
hypothetical protein
hypothetical protein id=24657096 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43963.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_1204_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2680..3849)
DNA (1170bp) protein (390aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] id=24657550 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00186763};; 1-hydroxy-2-methyl-2
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
qh_2_scaffold_1204_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4052..4975)
DNA (924bp) protein (308aa)
Rhomboid family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6X5_SALRM
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:CBH23780.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_1204_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5474..6217)
DNA (744bp) protein (248aa)
Cytoplasmic membrane protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4Q9_SALRD
cytoplasmic membrane protein
Rhomboid-like protein {ECO:0000313|EMBL:CBH23781.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_2_scaffold_1204_7
unknown

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comp(6338..7072)
DNA (735bp) protein (245aa)

This feature has no annotations

qh_2_scaffold_1204_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7087..9441
DNA (2355bp) protein (785aa)
transglycosylase domain-containing protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] id=24657554 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transglycosylase domain protein {ECO:0000313|EMBL:ABC43731.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
transglycosylase domain-containing protein
qh_2_scaffold_1204_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9555..10850
DNA (1296bp) protein (432aa)
nuclease SbcCD
nuclease SbcCD; K03547 exonuclease SbcD id=24657555 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Nuclease SbcCD, D subunit subfamily, putative {ECO:0000313|EMBL:ABC45592.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sou
qh_2_scaffold_1204_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10961..11581
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23785.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_1204_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11705..12556)
DNA (852bp) protein (284aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Salinibacter ruber RepID=ISPE_SALRD
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
qh_2_scaffold_1204_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12681..13631)
DNA (951bp) protein (317aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y2_SALRM
thrB; Homoserine kinase
qh_2_scaffold_1204_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13782..16247)
DNA (2466bp) protein (822aa)
Bifunctional aspartokinase/homoserine dehydrogenase II {ECO:0000313|EMBL:CBH23788.1}; EC=2.7.2.4 {ECO:0000313|EMBL:CBH23788.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
Bifunctional aspartokinase/homoserine dehydrogenase II n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y3_SALRM
metL; Bifunctional aspartokinase/homoserine dehydrogenase II
qh_2_scaffold_1204_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16349..17209)
DNA (861bp) protein (287aa)
purine nucleoside phosphorylase I; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] id=24657560 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=309807 species="Bac
purine nucleoside phosphorylase I
qh_2_scaffold_1204_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17591..18718)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23790.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_1204_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19006..20391
DNA (1386bp) protein (462aa)
hypothetical protein
hypothetical protein; K07071 id=24657595 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45307.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_1204_17
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20399..21103)
DNA (705bp) protein (235aa)
metallophosphoesterase n=1 Tax=Salisaeta longa RepID=UPI0003B76A5C
metallophosphoesterase Tax=GWA2_Deltaproteobacteria_54_12_curated
metallophosphoesterase
qh_2_scaffold_1204_18
unknown

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21131..21589
DNA (459bp) protein (153aa)

This feature has no annotations

qh_2_scaffold_1204_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21669..22934
DNA (1266bp) protein (422aa)
ddlA; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=24658140 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddlA; D-alanine--D-alanine ligase
qh_2_scaffold_1204_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23344..24261
DNA (918bp) protein (306aa)
hypothetical protein
hypothetical protein id=24658139 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25343.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_1204_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24544..25650
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBD7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46152.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_1204_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


25729..26529
DNA (801bp) protein (267aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=24658137 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
ksgA; dimethyladenosine transferase
Displaying 22 items

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