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qh_2_scaffold_521

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_521_trna_1
unknown

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317..390
DNA (74bp)
transferRNA
qh_2_scaffold_521_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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499..2466
DNA (1968bp) protein (656aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=24658750 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
thrS; threonyl-tRNA synthetase
qh_2_scaffold_521_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2710..3168
DNA (459bp) protein (153aa)
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=24658751 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_2_scaffold_521_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3364..3561
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=RL35_SALRD
hypothetical protein
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_2_scaffold_521_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3713..4060
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=2 Tax=Salinibacter ruber RepID=RL20_SALRD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_2_scaffold_521_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4643..5320)
DNA (678bp) protein (226aa)
OmpA family protein
OmpA family protein id=24657196 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
OmpA family protein {ECO:0000313|EMBL:ABC44333.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_2_scaffold_521_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5609..6781)
DNA (1173bp) protein (391aa)
Microsomal dipeptidase n=2 Tax=Salinibacter ruber RepID=D5H5T3_SALRM
microsomal dipeptidase
Putative dipeptidase {ECO:0000313|EMBL:ABC44309.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qh_2_scaffold_521_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7264..7848
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H7I7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44371.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_521_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8422..9144
DNA (723bp) protein (241aa)
LuxR family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B36AC2
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEN73606.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus
qh_2_scaffold_521_9
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(9323..10051)
DNA (729bp) protein (243aa)
UPI0003A26DF1 related cluster n=1 Tax=unknown RepID=UPI0003A26DF1
Tetratricopeptide TPR_1 repeat-containing protein
trichohyalin Tax=GWA2_WOR_2_47_8_curated
qh_2_scaffold_521_10
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10474..10695
DNA (222bp) protein (74aa)
hypothetical protein id=12555060 bin=CNBR_ACIDO species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EIT72047.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
qh_2_scaffold_521_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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10912..13314
DNA (2403bp) protein (801aa)
Transcriptional regulatory protein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIZ5_KORVE
transcriptional regulatory protein-like
Transcriptional regulatory protein-like protein {ECO:0000313|EMBL:ABF43155.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
qh_2_scaffold_521_12
Coprinopsis cinerea, Coprinopsis, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

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comp(13469..13795)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002E5320D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAU86128.1}; TaxID=240176 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; C
Displaying 13 items

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