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qh_2_scaffold_620

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_620_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3..473
DNA (471bp) protein (157aa)
Elongation factor Tu n=4 Tax=Salinibacter ruber RepID=EFTU_SALRD
tufA; translation elongation factor Tu (EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
qh_2_scaffold_620_trna_1
unknown

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586..659
DNA (74bp)
transferRNA
qh_2_scaffold_620_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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702..968
DNA (267bp) protein (89aa)
Protein translocase subunit SecE n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1P9_SALRD
Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qh_2_scaffold_620_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1035..1592
DNA (558bp) protein (186aa)
nusG; transcription antitermination protein NusG
nusG; transcription termination/antitermination factor NusG; K02601 transcriptional antiterminator NusG id=24659725 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qh_2_scaffold_620_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1712..2152
DNA (441bp) protein (147aa)
50S ribosomal protein L11
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=24659724 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000313|EMBL:CBH24896.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_2_scaffold_620_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2279..2992
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=2 Tax=Salinibacter ruber RepID=RL1_SALRD
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_2_scaffold_620_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3048..3584
DNA (537bp) protein (179aa)
rplJ; 50S ribosomal protein L10
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=24659722 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_2_scaffold_620_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3736..4119
DNA (384bp) protein (128aa)
rplL; 50S ribosomal protein L7/L12
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=24659721 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qh_2_scaffold_620_8
unknown

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comp(4232..4363)
DNA (132bp) protein (44aa)

This feature has no annotations

qh_2_scaffold_620_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4625..8488
DNA (3864bp) protein (1288aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=24659720 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
rpoB; DNA-directed RNA polymerase subunit beta
qh_2_scaffold_620_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9178..12762
DNA (3585bp) protein (1195aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
rpoC; DNA-directed RNA polymerase subunit beta'
qh_2_scaffold_620_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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13495..13656
DNA (162bp) protein (54aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24890.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein id=24659718 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Displaying 12 items

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