ggKbase home page

qh_2_scaffold_105

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_105_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..246)
DNA (246bp) protein (82aa)
ribA; riboflavin biosynthesis protein ribA; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=24656823 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Riboflavin biosynthesis protein ribA {ECO:0000313|EMBL:CBH22934.1}; EC=3.5.4.25 {ECO:0000313|EMBL:CBH22934.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
ribA; riboflavin biosynthesis protein ribA
qh_2_scaffold_105_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(299..637)
DNA (339bp) protein (113aa)
yajC; preprotein translocase subunit YajC
yajC; Preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=24656822 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Preprotein translocase subunit YajC {ECO:0000313|EMBL:CBH22933.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qh_2_scaffold_105_3
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1383..4253
DNA (2871bp) protein (957aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B353E4
Uncharacterized protein {ECO:0000313|EMBL:GAC15784.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
hypothetical protein
qh_2_scaffold_105_4
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4250..5254
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QJ30_GLANF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP28898.1}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitrati
qh_2_scaffold_105_5
unknown

Not on your lists

comp(5739..6092)
DNA (354bp) protein (118aa)

This feature has no annotations

qh_2_scaffold_105_6
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6463..8616
DNA (2154bp) protein (718aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B668C0
Uncharacterized protein {ECO:0000313|EMBL:GAC15782.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
hypothetical protein
qh_2_scaffold_105_7
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9052..10377
DNA (1326bp) protein (442aa)
Putative biofilm PGA synthesis N-glycosyltransferase PgaC n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QJ32_GLANF
biofilm PGA synthesis N-glycosyltransferase PgaC
Putative biofilm PGA synthesis N-glycosyltransferase PgaC {ECO:0000313|EMBL:AEP28900.1}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glacie
qh_2_scaffold_105_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10773..12194
DNA (1422bp) protein (474aa)
UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:CBH23639.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CBH23639.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
UDP-N-acetyl-D-glucosamine dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B7070C
tuaD; UDP-glucose/GDP-mannose dehydrogenase
qh_2_scaffold_105_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12253..12867)
DNA (615bp) protein (205aa)
hypothetical protein id=24656820 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22931.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_105_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13309..13902
DNA (594bp) protein (198aa)
rpe; Ribulose-phosphate-3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=24656818 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CBH22929.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes O
rpe; Ribulose-phosphate-3-epimerase
qh_2_scaffold_105_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13977..14906
DNA (930bp) protein (310aa)
short-chain dehydrogenase
short-chain dehydrogenase id=24656817 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Short-chain dehydrogenase/reductase (SDR) family protein {ECO:0000313|EMBL:CBH22928.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
qh_2_scaffold_105_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14919..15833)
DNA (915bp) protein (305aa)
SCO1/SenC family protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4H2_SALRM
SCO1/SenC family protein
SCO1/SenC family protein {ECO:0000313|EMBL:CBH22927.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_2_scaffold_105_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16090..16725
DNA (636bp) protein (212aa)
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor id=24656815 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor, putative {ECO:0000313|EMBL:ABC45273.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qh_2_scaffold_105_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16932..17939
DNA (1008bp) protein (336aa)
hypothetical protein
hypothetical protein id=24656814 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ABC45722.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qh_2_scaffold_105_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18058..19203)
DNA (1146bp) protein (382aa)
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=24656813 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=761659 species="Bacter
dnaN; DNA polymerase III subunit beta
qh_2_scaffold_105_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19508..21088)
DNA (1581bp) protein (527aa)
dnaA; chromosomal replication initiator protein DnaA
dnaA; chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=24656812 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Displaying 16 items

View Taxonomy