ggKbase home page

qh_2_scaffold_3868

Search features with annotation key words

Displaying 8 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_3868_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

63..284
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Salinibacter ruber RepID=IF1_SALRD
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_2_scaffold_3868_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


378..761
DNA (384bp) protein (128aa)
rpsM; 30S ribosomal protein S13
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=24658980 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_2_scaffold_3868_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


839..1240
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H825_SALRM
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBH24180.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_2_scaffold_3868_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1330..1932
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=2 Tax=Salinibacter ruber RepID=RS4_SALRD
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_2_scaffold_3868_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2317..2895
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpoA; DNA-directed RNA polymerase subunit alpha
qh_2_scaffold_3868_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


2965..3558
DNA (594bp) protein (198aa)
rplQ; 50S ribosomal protein L17
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=24658984 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_2_scaffold_3868_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4431..6821
DNA (2391bp) protein (797aa)
ligand-gated channel n=1 Tax=Salisaeta longa RepID=UPI0003B62258
hypothetical protein
TonB dependent receptor, putative {ECO:0000313|EMBL:ABC45191.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qh_2_scaffold_3868_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(6847..7185)
DNA (339bp) protein (113aa)
Putative aromatic metabolite ABC transporter n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXW5_THERP
putative aromatic metabolite ABC transporter
Putative aromatic metabolite ABC transporter {ECO:0000313|EMBL:ACM05763.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobi
Displaying 8 items

View Taxonomy