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qh_2_scaffold_221

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_221_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

qh_2_scaffold_221_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

400..576
DNA (177bp) protein (59aa)
MaoC domain protein dehydratase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J662_HALJB
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ADJ15780.1}; MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:ELY37196.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Hal
qh_2_scaffold_221_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(622..1995)
DNA (1374bp) protein (458aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN27_9EURY
amidohydrolase
qh_2_scaffold_221_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2857..3564
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAE4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42762.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_2_scaffold_221_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3687..3884
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MSS3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA48403.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qh_2_scaffold_221_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4073..4918
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX64_9EURY
ATP phosphoribosyltransferase
qh_2_scaffold_221_7
unknown

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5001..5126
DNA (126bp) protein (42aa)

This feature has no annotations

qh_2_scaffold_221_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5218..5589)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7S8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53608.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_221_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5624..6100)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30033.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
endoribonuclease L-PSP
qh_2_scaffold_221_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6300..6875)
DNA (576bp) protein (192aa)
TATA-box-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J609_HALJB
TATA-box binding family protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
qh_2_scaffold_221_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7182..8129
DNA (948bp) protein (316aa)
RNA methylase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJV0_9EURY
RNA methylase {ECO:0000313|EMBL:ELZ22918.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
RNA methylase
qh_2_scaffold_221_12
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8159..8569)
DNA (411bp) protein (137aa)
Ferredoxin n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P2B2_9EURY
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KDS90397.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
2Fe-2S iron-sulfur cluster binding domain-containing protein
qh_2_scaffold_221_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9315..10349)
DNA (1035bp) protein (345aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7H6_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
Transcription factor TFIIB cyclin-related protein
qh_2_scaffold_221_14
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10608..11327
DNA (720bp) protein (240aa)
Transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R9S1_HALMT
transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFK20981.1}; Transcriptional regulator {ECO:0000313|EMBL:AHZ24155.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
qh_2_scaffold_221_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11411..11923
DNA (513bp) protein (171aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P465_HALMD
Bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:ACV47887.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
qh_2_scaffold_221_16
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12073..12771
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1M9_9EURY
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ17181.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
qh_2_scaffold_221_17
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13008..13667)
DNA (660bp) protein (220aa)
Response regulator n=6 Tax=Haloferax RepID=L5NYI0_9EURY
Sensor histidine kinase TmoS {ECO:0000313|EMBL:CQR50244.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
response regulator
qh_2_scaffold_221_18
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13857..15785
DNA (1929bp) protein (643aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS sensor histidine kinase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1MVK2_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG94419.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
qh_2_scaffold_221_19
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15956..17077)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F762_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ55042.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qh_2_scaffold_221_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17080..18261)
DNA (1182bp) protein (394aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; TaxID=931277 species="Arc
pri1; DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MC27_HALMO
qh_2_scaffold_221_21
unknown

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comp(18458..18718)
DNA (261bp) protein (87aa)

This feature has no annotations

qh_2_scaffold_221_22
unknown

Not on your lists

comp(18724..19050)
DNA (327bp) protein (109aa)

This feature has no annotations

qh_2_scaffold_221_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19137..19541)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZI2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50259.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_221_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19611..19958)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MA34_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42208.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_2_scaffold_221_25
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19904..20695)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MA34_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42208.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_2_scaffold_221_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20796..23324
DNA (2529bp) protein (843aa)
Pre-peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3T0_9EURY
Pre-peptidase {ECO:0000313|EMBL:EMA52203.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
pre-peptidase
qh_2_scaffold_221_27
unknown

Not on your lists

23509..24003
DNA (495bp) protein (165aa)

This feature has no annotations

Displaying 27 items

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