ggKbase home page

qh_2_scaffold_341

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_341_1
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..135
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XLJ3_9EURY
transposase
Uncharacterized protein {ECO:0000313|EMBL:ELY62437.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
qh_2_scaffold_341_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(336..695)
DNA (360bp) protein (120aa)
Dehydrogenase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRJ5_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERH08312.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
fabG; oxidoreductase
qh_2_scaffold_341_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(697..1083)
DNA (387bp) protein (129aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Dehydrogenase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRJ5_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERH08312.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_2_scaffold_341_4
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1823..2473)
DNA (651bp) protein (217aa)
Siroheme synthase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ABU6_NATGS
siroheme synthase
Siroheme synthase {ECO:0000313|EMBL:ELY66891.1}; Siroheme synthase, N-terminal domain protein {ECO:0000313|EMBL:AFZ71368.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; N
qh_2_scaffold_341_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2756..4054)
DNA (1299bp) protein (433aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=122748
Probable cobyrinic acid A,C-diamide synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DI97_9EURY
cobyrinic acid a,c-diamide synthase
qh_2_scaffold_341_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4098..5066)
DNA (969bp) protein (323aa)
UPF0284 protein C449_09389 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGM1_9EURY
UPF0284 protein C449_09389 {ECO:0000256|HAMAP-Rule:MF_01086}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
qh_2_scaffold_341_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5298..6329
DNA (1032bp) protein (344aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXE1_9EURY
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EFW90944.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
qh_2_scaffold_341_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6681..7466
DNA (786bp) protein (262aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4E8_HALMD
cobalamin (vitamin B12) biosynthesis CbiX protein
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ACV47970.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source=
qh_2_scaffold_341_9
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7495..8346)
DNA (852bp) protein (284aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWX8_HALLT
cobalt-precorrin-6Y C(5)-methyltransferase
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:ACM58969.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
qh_2_scaffold_341_10
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8336..9082)
DNA (747bp) protein (249aa)
Precorrin-8X methylmutase n=2 Tax=Haloarcula hispanica RepID=G0HRR8_HALHT
precorrin isomerase
Precorrin isomerase {ECO:0000313|EMBL:AHB64725.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qh_2_scaffold_341_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9072..9470)
DNA (399bp) protein (133aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9W0_9EURY
qh_2_scaffold_341_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9524..13240)
DNA (3717bp) protein (1239aa)
Cobalamin biosynthesis protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N988_9EURY
Cobalamin biosynthesis protein {ECO:0000313|EMBL:EMA53220.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
cobalt chelatase
qh_2_scaffold_341_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13275..15575
DNA (2301bp) protein (767aa)
magnesium chelatase (EC:6.6.1.1)
magnesium chelatase n=1 Tax=Halomicrobium katesii RepID=UPI000374196D
Protporphyrin IX magnesium chelatase {ECO:0000313|EMBL:EMA44866.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
qh_2_scaffold_341_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15637..15828
DNA (192bp) protein (64aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HRR5_HALHT
cobalamin cluster protein
Cobalamin cluster protein {ECO:0000313|EMBL:AHB64722.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601
qh_2_scaffold_341_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15841..16602
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33912.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qh_2_scaffold_341_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16599..16952
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5R0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53216.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_2_scaffold_341_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17285..18613)
DNA (1329bp) protein (443aa)
Tup1 like transcriptional repressor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK96_9EURY
Tup1 like transcriptional repressor {ECO:0000313|EMBL:EMA44870.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
tup1; Tup1 like transcriptional repressor
qh_2_scaffold_341_18
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18606..18977)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEM3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58979.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qh_2_scaffold_341_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19007..20251)
DNA (1245bp) protein (415aa)
Cobalamin (Vitamin B12) biosynthesis CbiX protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6N0_9EURY
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:EMA53213.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
cobalamin (vitamin B12) biosynthesis CbiX protein
qh_2_scaffold_341_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20248..20976)
DNA (729bp) protein (243aa)
Cobalamin operon protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5L4_9EURY
Cobalamin operon protein {ECO:0000313|EMBL:EMA53212.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
cobalamin operon protein
qh_2_scaffold_341_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20969..21226)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NH19_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56404.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_341_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21216..21311)
DNA (96bp) protein (32aa)
Precorrin-3B C(17)-methyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NIB1_9EURY
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:EMA56405.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
cobJ; precorrin-3B C17-methyltransferase
qh_2_scaffold_341_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21317..21850)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLP4_9EURY
precorrin-3B C(17)-methyltransferase
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:ACV47983.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
Displaying 23 items

View Taxonomy