ggKbase home page

qh_2_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_39_1
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..772
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXE3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY54149.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
ybbK; stomatin/prohibitin-family membrane protease-like protein subunit YbbK
qh_2_scaffold_39_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(920..1222)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A3J8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59973.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_2_scaffold_39_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1351..2142
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IJ85_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ95928.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qh_2_scaffold_39_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2224..4281)
DNA (2058bp) protein (686aa)
UvrABC system protein B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAW0_9EURY
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
UvrABC system protein B
qh_2_scaffold_39_5
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4495..5325
DNA (831bp) protein (277aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TGY8_DESML
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
qh_2_scaffold_39_6
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5416..6750)
DNA (1335bp) protein (445aa)
Major facilitator family hexuronate transporter n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JKI2_9EURY
Major facilitator family hexuronate transporter {ECO:0000313|EMBL:EMA08484.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax
tp14; major facilitator family hexuronate transporter
qh_2_scaffold_39_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7107..8069)
DNA (963bp) protein (321aa)
Putative HTH-type transcriptional regulatory protein C450_04057 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCA8_9EURY
Putative HTH-type transcriptional regulatory protein C450_04057 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
hypothetical protein
qh_2_scaffold_39_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8326..9687
DNA (1362bp) protein (454aa)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4Z9_HALXS
hypothetical protein
qh_2_scaffold_39_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9717..10862)
DNA (1146bp) protein (382aa)
Threonine synthase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5B6_HALJB
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ADJ13697.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (st
qh_2_scaffold_39_10
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11039..11419)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IQD9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ97689.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
hypothetical protein
qh_2_scaffold_39_11
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11684..12640)
DNA (957bp) protein (319aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AUR4_9EURY
succinylglutamate desuccinylase/aspartoacylase
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ELZ01683.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba c
qh_2_scaffold_39_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12844..13098
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2A2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28827.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_2_scaffold_39_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13211..13636)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J467_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15459.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_2_scaffold_39_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14523..15584
DNA (1062bp) protein (354aa)
Phosphate ABC transporter substrate-binding protein, phot family n=2 Tax=Halococcus RepID=M0NGI9_9EURY
Phosphate ABC transporter substrate-binding protein, phot family {ECO:0000313|EMBL:EMA56668.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
phosphate ABC transporter substrate-binding protein, phot family
qh_2_scaffold_39_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15693..16700
DNA (1008bp) protein (336aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQN7_9EURY
Phosphate ABC transporter, inner membrane subunit PstC {ECO:0000313|EMBL:EMA35801.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
phosphate ABC transporter, inner membrane subunit PstC
qh_2_scaffold_39_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16697..18151
DNA (1455bp) protein (485aa)
Phosphate ABC transporter permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTF6_HALMO
Phosphate ABC transporter permease {ECO:0000313|EMBL:EMA48014.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhu
pstA2; phosphate ABC transporter permease
qh_2_scaffold_39_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18183..18974)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHS1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44888.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_2_scaffold_39_18
unknown

Not on your lists

19086..19649
DNA (564bp) protein (188aa)

This feature has no annotations

qh_2_scaffold_39_19
unknown

Not on your lists

19719..20483
DNA (765bp) protein (255aa)

This feature has no annotations

qh_2_scaffold_39_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20925..22178)
DNA (1254bp) protein (418aa)
TrkA-C domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBV2_9EURY
TrkA-C domain-containing protein {ECO:0000313|EMBL:EMA54150.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailan
TrkA-C domain-containing protein
qh_2_scaffold_39_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22232..23263)
DNA (1032bp) protein (344aa)
Membrane protein n=1 Tax=Halogranum salarium B-1 RepID=J3JET9_9EURY
Membrane protein {ECO:0000313|EMBL:EJN58656.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ribonuclease BN-like protein
qh_2_scaffold_39_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23444..24421)
DNA (978bp) protein (326aa)
ddh; 2-D-hydroxyacid dehydrogenase (EC:1.1.1.-)
2-D-hydroxyacid dehydrogenase {ECO:0000313|EMBL:CCQ36284.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCQ36284.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
2-D-hydroxyacid dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1C8_NATM8
qh_2_scaffold_39_23
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24637..25008
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KN39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA22802.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qh_2_scaffold_39_24
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(25159..27000)
DNA (1842bp) protein (614aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N037_9EURY
qh_2_scaffold_39_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(27000..28511)
DNA (1512bp) protein (504aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20) id=24616130 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:ESP87957.1}; EC=6.1.1.20 {ECO:0000313|EMBL:ESP87957.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
phenylalanyl-tRNA synthetase, alpha subunit
qh_2_scaffold_39_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28836..30554)
DNA (1719bp) protein (573aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1227455 species="Archaea
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBL5_9EURY
qh_2_scaffold_39_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31096..31641
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_2_scaffold_39_28
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31688..32401
DNA (714bp) protein (238aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=halophilic archaeon J07HX64 RepID=U1QY03_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10817.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
trans-aconitate 2-methyltransferase
qh_2_scaffold_39_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32406..33587)
DNA (1182bp) protein (394aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=797114 species="Archaea;
tRNA-splicing endonuclease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2U7_9EURY
tRNA intron endonuclease
qh_2_scaffold_39_30
unknown

Not on your lists

33633..34109
DNA (477bp) protein (159aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

View Taxonomy