ggKbase home page

qh_2_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 100 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_42_1
unknown

Not on your lists

1..177
DNA (177bp) protein (59aa)

This feature has no annotations

qh_2_scaffold_42_2
unknown

Not on your lists

278..772
DNA (495bp) protein (165aa)

This feature has no annotations

qh_2_scaffold_42_3
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1020..1679
DNA (660bp) protein (220aa)
superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1108 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflex
Superoxide dismutase n=1 Tax=Chloroflexus aurantiacus RepID=Q7X4G4_CHLAU
qh_2_scaffold_42_4
unknown

Not on your lists

comp(2040..2213)
DNA (174bp) protein (58aa)

This feature has no annotations

qh_2_scaffold_42_5
unknown

Not on your lists

comp(2349..2552)
DNA (204bp) protein (68aa)
tp15; major facilitator family multidrug efflux transporter
qh_2_scaffold_42_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2772..3212)
DNA (441bp) protein (147aa)
MarR family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAS4_HALJB
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:ADJ14796.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkali
qh_2_scaffold_42_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3652..4707
DNA (1056bp) protein (352aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component id=24632665 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ERG94438.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae
qh_2_scaffold_42_8

Not on your lists

4700..5599
DNA (900bp) protein (300aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=uncultured archaeon A07HB70 RepID=V4XSW7_9ARCH
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ESS05278.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
ssuB; putative sulfonate ABC transporter ATP-binding protein
qh_2_scaffold_42_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5939..6451
DNA (513bp) protein (171aa)
binding-protein-dependent transporters inner membrane component id=24632667 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ERG94440.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
binding-protein-dependent transporters inner membrane component
qh_2_scaffold_42_10
unknown

Not on your lists

comp(6364..6999)
DNA (636bp) protein (212aa)

This feature has no annotations

qh_2_scaffold_42_11
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(7583..8746)
DNA (1164bp) protein (388aa)
FG-GAP repeat-containing protein Tax=RBG_13_Spirochaetes_68_11_curated
FG-GAP repeat protein id=1806262 bin=GWE2_Bacteroidetes_41_25 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
qh_2_scaffold_42_12
unknown

Not on your lists

9256..9435
DNA (180bp) protein (60aa)

This feature has no annotations

qh_2_scaffold_42_13
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9487..9705)
DNA (219bp) protein (73aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Xenobiotic-transporting ATPase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PM92_9EURY
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:EMA70774.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JC
qh_2_scaffold_42_14

Not on your lists

comp(9713..10069)
DNA (357bp) protein (119aa)
Multidrug ABC transporter ATPase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SWE2_9EURY
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:ESS13000.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC-type multidrug transport system, ATPase and permease component
qh_2_scaffold_42_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10201..10995)
DNA (795bp) protein (265aa)
ABC-type transport system ATP-binding/permease protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QU27_9EURY
ABC-type transport system ATP-binding/permease protein {ECO:0000313|EMBL:EFW92106.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" sou
ABC-type transport system ATP-binding protein
qh_2_scaffold_42_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11372..12397)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23715.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
putative methicillin resistance protein
qh_2_scaffold_42_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12394..13995)
DNA (1602bp) protein (534aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQ74_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EFW93138.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source
type I phosphodiesterase/nucleotide pyrophosphatase
qh_2_scaffold_42_18
unknown

Not on your lists

comp(14346..15008)
DNA (663bp) protein (221aa)

This feature has no annotations

qh_2_scaffold_42_19

Not on your lists

15152..15721
DNA (570bp) protein (190aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPY2_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS10564.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
major facilitator superfamily protein
qh_2_scaffold_42_20
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15789..16382
DNA (594bp) protein (198aa)
Type 11 methyltransferase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X876_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELY57949.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus D
type 11 methyltransferase
qh_2_scaffold_42_21
unknown

Not on your lists

16465..16602
DNA (138bp) protein (46aa)

This feature has no annotations

qh_2_scaffold_42_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16670..17125)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7H4_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA50163.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_42_23
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17241..17738
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3T4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13425.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qh_2_scaffold_42_24
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17875..19263)
DNA (1389bp) protein (463aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLN7_HALBP
qh_2_scaffold_42_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19503..20126)
DNA (624bp) protein (208aa)
metalloprotease (EC:3.4.24.-)
Peptidase M50 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH55_9EURY
Peptidase M50 {ECO:0000313|EMBL:EMA44688.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
qh_2_scaffold_42_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20194..21549)
DNA (1356bp) protein (452aa)
TraB family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4R9_HALJB
TraB family protein
TraB family protein {ECO:0000313|EMBL:ADJ15536.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
qh_2_scaffold_42_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21676..22134)
DNA (459bp) protein (153aa)
Thioesterase superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q6_9EURY
Thioesterase superfamily protein {ECO:0000313|EMBL:EMA52491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
thioesterase superfamily protein
qh_2_scaffold_42_28
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22215..22622)
DNA (408bp) protein (136aa)
hypothetical protein id=24630687 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG92980.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_2_scaffold_42_29
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22633..22890)
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7G3_9EURY
Transcriptional regulator, AbrB family protein {ECO:0000313|EMBL:ELZ43761.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transcriptional regulator, AbrB family
qh_2_scaffold_42_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23028..23738)
DNA (711bp) protein (237aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9M5_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA42451.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
MaoC domain-containing protein dehydratase
Displaying items 1-30 of 100 in total

View Taxonomy