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qh_2_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_44_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..674
DNA (672bp) protein (224aa)
Glycoside hydrolase, family 20, catalytic core n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3E8_HALMD
glycoside hydrolase family protein
Glycoside hydrolase, family 20, catalytic core {ECO:0000313|EMBL:ACV47620.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicr
qh_2_scaffold_44_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

790..3051
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P430_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47852.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_2_scaffold_44_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3154..4491
DNA (1338bp) protein (446aa)
hmgB, mvaB; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X6R4_9EURY
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ELY57474.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
qh_2_scaffold_44_4
unknown

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5001..5210
DNA (210bp) protein (70aa)

This feature has no annotations

qh_2_scaffold_44_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5628..7205)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFJ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44487.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_2_scaffold_44_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7349..8098
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPJ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24528.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_2_scaffold_44_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8254..9204
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036273D4
Uncharacterized protein {ECO:0000313|EMBL:ELZ44869.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
qh_2_scaffold_44_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9232..10359)
DNA (1128bp) protein (376aa)
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
DNA topoisomerase (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGL6_9EURY
qh_2_scaffold_44_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10356..12806)
DNA (2451bp) protein (817aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI subunit B (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIF9_9EURY
qh_2_scaffold_44_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12999..14291)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91036.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_2_scaffold_44_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14646..16559
DNA (1914bp) protein (638aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1227457 species="Archaea; Eu
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Halococcus thailandensis RepID=M0MZD8_9EURY
qh_2_scaffold_44_12
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16673..19279
DNA (2607bp) protein (869aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:EMA30935.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrial
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LG09_9EURY
qh_2_scaffold_44_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19556..20512)
DNA (957bp) protein (319aa)
Arginase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDL9_9EURY
Arginase {ECO:0000313|EMBL:EMA55653.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
arginase
qh_2_scaffold_44_14

Not on your lists

comp(20638..21552)
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase n=1 Tax=halophilic archaeon DL31 RepID=G2ML17_9ARCH
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN05418.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_2_scaffold_44_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21706..22230
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4Y0_HALJB
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:ELY36325.1}; Uncharacterized protein {ECO:0000313|EMBL:ADJ15597.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
qh_2_scaffold_44_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22584..23738
DNA (1155bp) protein (385aa)
NADH dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY21_9EURY
NADH dehydrogenase {ECO:0000313|EMBL:EMA49320.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
NADH dehydrogenase, FAD-containing subunit
qh_2_scaffold_44_17
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23927..24805)
DNA (879bp) protein (293aa)
udp1; uridine phosphorylase (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0IEB6_9EURY
Uridine phosphorylase {ECO:0000313|EMBL:ELZ93794.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;
qh_2_scaffold_44_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24802..25233)
DNA (432bp) protein (144aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGF4_9EURY
Cytidine deaminase {ECO:0000313|EMBL:ELZ34561.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
qh_2_scaffold_44_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25554..27272)
DNA (1719bp) protein (573aa)
Phosphomannomutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV54_9EURY
Phosphomannomutase {ECO:0000313|EMBL:EMA49213.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
qh_2_scaffold_44_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27432..27995
DNA (564bp) protein (188aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N725_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EMA53666.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
membrane-bound metal-dependent hydrolase
qh_2_scaffold_44_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28159..28629)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49214.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_2_scaffold_44_22
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28894..31296
DNA (2403bp) protein (801aa)
Type II secretion system protein E n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBQ2_HALXS
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:AEH38320.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (s
qh_2_scaffold_44_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31293..33416
DNA (2124bp) protein (708aa)
Type II secretion system protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIG7_9EURY
type II/IV secretion system transmembrane protein
Type II secretion system protein {ECO:0000313|EMBL:ERJ07059.1}; Type II secretion system, protein F {ECO:0000313|EMBL:CCQ34825.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobact
qh_2_scaffold_44_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33557..34207
DNA (651bp) protein (217aa)
Methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M3P7_HALMO
Methyltransferase {ECO:0000313|EMBL:EMA40437.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
methyltransferase type 11
qh_2_scaffold_44_trna_1
unknown

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34291..34361
DNA (71bp)
transferRNA
qh_2_scaffold_44_25
unknown

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comp(34398..34550)
DNA (153bp) protein (51aa)

This feature has no annotations

qh_2_scaffold_44_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34649..35077)
DNA (429bp) protein (143aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
qh_2_scaffold_44_27
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(35260..36042)
DNA (783bp) protein (261aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA12_9EURY
ABC transporter {ECO:0000313|EMBL:EMA41464.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC transporter
qh_2_scaffold_44_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(36116..37120)
DNA (1005bp) protein (335aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME56_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
multidrug ABC transporter ATPase
qh_2_scaffold_44_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(37396..38508)
DNA (1113bp) protein (371aa)
cellulase (EC:3.2.1.4)
Peptidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY40_9EURY
Peptidase {ECO:0000313|EMBL:EMA50642.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Displaying items 1-30 of 79 in total

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