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qh_2_scaffold_485

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_485_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(362..694)
DNA (333bp) protein (111aa)
Transport protein (Probable substrate ammonium) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITI1_NATPD
tp39; ammonium transporter
Transport protein (Probable substrate ammonium) {ECO:0000313|EMBL:CAI48552.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qh_2_scaffold_485_2
unknown

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1304..1921
DNA (618bp) protein (206aa)

This feature has no annotations

qh_2_scaffold_485_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2376..3428)
DNA (1053bp) protein (351aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1};; TaxID=358396 species="Arc
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LQF4_9EURY
qh_2_scaffold_485_4
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3620..4534)
DNA (915bp) protein (305aa)
Glycosyl transferase n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A1Z1_9PROT
Glycosyl transferase {ECO:0000313|EMBL:EHI48726.1}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
glycosyl transferase
qh_2_scaffold_485_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4545..5327)
DNA (783bp) protein (261aa)
Putative membrane-associated, metal-dependent hydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GV57_9EURY
Putative membrane-associated, metal-dependent hydrolase {ECO:0000313|EMBL:ESP89031.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobo
putative membrane-associated, metal-dependent hydrolase
qh_2_scaffold_485_6
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5566..6417)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PTC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA72085.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
putative membrane-associated, metal-dependent hydrolase
qh_2_scaffold_485_7
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6548..8812
DNA (2265bp) protein (755aa)
beta-glucosidase (EC:3.2.1.21)
Beta-glucosidase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A624_9EURY
Beta-glucosidase {ECO:0000313|EMBL:ELY93352.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.;"
qh_2_scaffold_485_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8837..11044)
DNA (2208bp) protein (736aa)
Fe-S oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDZ8_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:EMA54910.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
Fe-S oxidoreductase
qh_2_scaffold_485_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11145..11852)
DNA (708bp) protein (236aa)
Cobalt transporter n=3 Tax=Halococcus hamelinensis RepID=M0M6S9_9EURY
Cobalt transporter {ECO:0000313|EMBL:EMA41497.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC-type cobalt transport system, permease component CbiQ
qh_2_scaffold_485_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11988..12797)
DNA (810bp) protein (270aa)
Putative cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDQ1_9EURY
Putative cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA43876.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
abc21a; cobalt ABC transporter ATP-binding protein
qh_2_scaffold_485_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12794..13375)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHH6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43875.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
BioY protein
qh_2_scaffold_485_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13574..14173
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9P5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01679.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qh_2_scaffold_485_13
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14519..14830
DNA (312bp) protein (104aa)
DNA-directed RNA polymerase subunit n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZUM3_9EURY
Transcription termination factor Tfs {ECO:0000313|EMBL:AKH97223.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanae
transcription termination factor Tfs
qh_2_scaffold_485_14
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15242..15463)
DNA (222bp) protein (74aa)
GCN5-related N-acetyltransferase n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z4L6_9EURY
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ELY76636.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 37
qh_2_scaffold_485_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15837..16583
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCU2_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42225.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_2_scaffold_485_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16552..16953)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49047.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
oligopeptide/dipeptide ABC transporter, ATP-binding protein
qh_2_scaffold_485_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17065..17277)
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Halococcus RepID=M0MQG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49046.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_2_scaffold_485_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17355..18155)
DNA (801bp) protein (267aa)
Type 12 methyltransferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GSJ6_9EURY
Type 12 methyltransferase {ECO:0000313|EMBL:ESP88066.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
tRNA(1-methyladenosine) methyltransferase-like methyltransferase
qh_2_scaffold_485_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18152..18589)
DNA (438bp) protein (146aa)
Nascent polypeptide-associated complex protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHF6_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
nac; nascent polypeptide-associated complex protein
qh_2_scaffold_485_20

Not on your lists

comp(18730..19386)
DNA (657bp) protein (219aa)
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y232_9ARCH
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit {ECO:0000313|EMBL:ESS08748.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
PUA domain containing protein
qh_2_scaffold_485_21
unknown

Not on your lists

19684..19857
DNA (174bp) protein (58aa)

This feature has no annotations

qh_2_scaffold_485_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19953..20165)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N703_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44958.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_2_scaffold_485_23
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20832..21785
DNA (954bp) protein (318aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1495067 specie
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DB18_HALXS
dihydrodipicolinate synthase
qh_2_scaffold_485_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21782..22600
DNA (819bp) protein (273aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102};; TaxID=1132509 spe
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LPR3_9EURY
dihydrodipicolinate reductase
qh_2_scaffold_485_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22597..23352
DNA (756bp) protein (252aa)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase {ECO:0000313|EMBL:EMA44961.1}; EC=2.3.1.117 {ECO:0000313|EMBL:EMA44961.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGX1_9EURY
Displaying 25 items

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