ggKbase home page

qh_2_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_65_1
unknown

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

qh_2_scaffold_65_2
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(107..547)
DNA (441bp) protein (147aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0ARH3_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELZ01140.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Nat
bacterio-opsin activator HTH domain-containing protein
qh_2_scaffold_65_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

735..2588
DNA (1854bp) protein (618aa)
Acetyl/propionyl-CoA carboxylase, alpha subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N013_9EURY
Acetyl/propionyl-CoA carboxylase, alpha subunit {ECO:0000313|EMBL:EMA51206.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
carbamoyl-phosphate synthase L chain ATP-binding protein
qh_2_scaffold_65_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2695..3690
DNA (996bp) protein (332aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KI77_9EURY
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EMA20608.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula califo
qh_2_scaffold_65_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3808..4803)
DNA (996bp) protein (332aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJS9_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA44979.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
putative dehydrogenase
qh_2_scaffold_65_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5030..5398
DNA (369bp) protein (123aa)
pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
Pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML78_9EURY
Pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:EMA46123.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
qh_2_scaffold_65_7
unknown

Not on your lists

5403..5624
DNA (222bp) protein (74aa)

This feature has no annotations

qh_2_scaffold_65_8
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5839..6369
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U2Q8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EMD82252.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
hypothetical protein
qh_2_scaffold_65_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6619..7254
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MX22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50287.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_65_10
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7615..8670)
DNA (1056bp) protein (352aa)
Glutamate dehydrogenase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F3F1_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
Glu/Leu/Phe/Val dehydrogenase
qh_2_scaffold_65_11
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8878..9312)
DNA (435bp) protein (145aa)
ABC transporter permease n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GVI2_HALVD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:ELY27609.1}; ABC-type transport system permease protein {ECO:0000313|EMBL:ADE04635.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferaca
qh_2_scaffold_65_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9559..10677)
DNA (1119bp) protein (373aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M437_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA39130.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
ABC transporter ATP-binding protein
qh_2_scaffold_65_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10885..11580
DNA (696bp) protein (232aa)
NAD(P)H nitroreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JEZ6_9EURY
NAD(P)H nitroreductase {ECO:0000313|EMBL:EJN58814.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
nitroreductase
qh_2_scaffold_65_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11729..13012
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MTS9_9EURY
Major facilitator superfamily MFS1 {ECO:0000313|EMBL:EMA47875.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
MFS transporter
qh_2_scaffold_65_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13093..13962
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49263.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_2_scaffold_65_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14030..15337)
DNA (1308bp) protein (436aa)
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J309_9EURY
Alpha-galactosidase {ECO:0000313|EMBL:ESP89782.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
qh_2_scaffold_65_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15550..16575
DNA (1026bp) protein (342aa)
Oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JGM8_9EURY
Oxidoreductase {ECO:0000313|EMBL:EJN60231.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
aryl-alcohol dehydrogenase
qh_2_scaffold_65_18
unknown

Not on your lists

comp(16627..16848)
DNA (222bp) protein (74aa)

This feature has no annotations

qh_2_scaffold_65_19

Not on your lists

comp(16975..17319)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XNN8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10079.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
qh_2_scaffold_65_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17583..17918
DNA (336bp) protein (112aa)
30S ribosomal protein S10 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT94_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
30S ribosomal protein S10
qh_2_scaffold_65_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18107..19390
DNA (1284bp) protein (428aa)
Indole-3-acetyl-L-aspartic acid hydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT90_9EURY
Indole-3-acetyl-L-aspartic acid hydrolase {ECO:0000313|EMBL:EFW91819.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
indole-3-acetyl-L-aspartic acid hydrolase
qh_2_scaffold_65_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19883..20356
DNA (474bp) protein (158aa)
Permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ35_9EURY
Permease {ECO:0000313|EMBL:ELZ27149.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
auxin efflux carrier
qh_2_scaffold_65_23
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20554..22209
DNA (1656bp) protein (552aa)
Glycosidase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKJ2_9CYAN
glycosidase
Glycosidase {ECO:0000313|EMBL:AFZ20331.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
qh_2_scaffold_65_24
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22311..22802)
DNA (492bp) protein (164aa)
MOSC domain containing protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S228_HALTV
MOSC domain containing protein
MOSC domain containing protein {ECO:0000313|EMBL:ADB63425.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica
qh_2_scaffold_65_25
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22994..23413)
DNA (420bp) protein (140aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ELY95723.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ELY95723.1};; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0AEF8_9EURY
qh_2_scaffold_65_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24362..25636)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92999.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_2_scaffold_65_27
unknown

Not on your lists

25909..26280
DNA (372bp) protein (124aa)

This feature has no annotations

qh_2_scaffold_65_28
R_NC10_66_22, NC10, Bacteria

Not on your lists

26450..26926
DNA (477bp) protein (159aa)
NUDIX hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV08_9EURY
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ADP-ribose pyrophosphatase
qh_2_scaffold_65_29
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26947..27177)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7C0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE57121.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
qh_2_scaffold_65_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27301..28212)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N733_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52480.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
Displaying items 1-30 of 89 in total

View Taxonomy