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qh_2_scaffold_78

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_78_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..318)
DNA (318bp) protein (106aa)
Cation diffusion facilitator family transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D6V7_9EURY
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ELZ30422.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
cation diffusion facilitator family transporter
qh_2_scaffold_78_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(473..2203)
DNA (1731bp) protein (577aa)
L-lactate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8D6_9EURY
L-lactate permease {ECO:0000313|EMBL:EMA53838.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
L-lactate permease
qh_2_scaffold_78_3
unknown

Not on your lists

2360..2899
DNA (540bp) protein (180aa)

This feature has no annotations

qh_2_scaffold_78_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2779..3081)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI0003763AA9
Uncharacterized protein {ECO:0000313|EMBL:EMA13993.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qh_2_scaffold_78_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3311..3850
DNA (540bp) protein (180aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M301_9EURY
hypothetical protein
qh_2_scaffold_78_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3974..4105
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:CAI48319.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
hypothetical protein
qh_2_scaffold_78_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4090..5151)
DNA (1062bp) protein (354aa)
l-threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC93_9EURY
Threonine aldolase {ECO:0000313|EMBL:EMA55193.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
qh_2_scaffold_78_8
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5227..6015)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YT21_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY76607.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qh_2_scaffold_78_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6428..7519
DNA (1092bp) protein (364aa)
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) {ECO:0000313|EMBL:CAI48527.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAI48527.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacter
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK6_NATPD
pepB_2; aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) 2
qh_2_scaffold_78_10
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7742..8431
DNA (690bp) protein (230aa)
K+ transport system, NAD-binding component n=1 Tax=halophilic archaeon J07HB67 RepID=U1PLH7_9EURY
K+ transport system, NAD-binding component {ECO:0000313|EMBL:ERH11301.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
K+ transport system, NAD-binding component
qh_2_scaffold_78_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8611..9012)
DNA (402bp) protein (134aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1227457 species="Archaea; Eurya
polD1; DNA-directed DNA polymerase D exonuclease subunit DP1 (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4N0_9EURY
qh_2_scaffold_78_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9020..10186)
DNA (1167bp) protein (389aa)
DNA polymerase ii small subunit (EC:2.7.7.7)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=469382 species="Archaea; Euryar
DNA polymerase II small subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NST6_HALBP
qh_2_scaffold_78_13
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10286..10987
DNA (702bp) protein (234aa)
Signal peptidase I n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ACT1_9EURY
Signal peptidase I {ECO:0000313|EMBL:GAD52583.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sec11a; signal sequence peptidase
qh_2_scaffold_78_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11227..12015)
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2X8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39758.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
qh_2_scaffold_78_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12212..14026)
DNA (1815bp) protein (605aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1F2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
qh_2_scaffold_78_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14960..15592
DNA (633bp) protein (211aa)
GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA72_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA42692.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
small GTP-binding protein domain
qh_2_scaffold_78_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15596..16024
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42693.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_2_scaffold_78_18
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16029..17150
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XVW7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65551.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qh_2_scaffold_78_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17311..18816
DNA (1506bp) protein (502aa)
MATE efflux family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYA0_9EURY
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ELZ28206.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
qh_2_scaffold_78_20
unknown

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18911..19000
DNA (90bp) protein (30aa)

This feature has no annotations

qh_2_scaffold_78_21
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19000..19791
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG40_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44323.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qh_2_scaffold_78_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19946..20524)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_2_scaffold_78_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20626..21081)
DNA (456bp) protein (152aa)
Conserved hypothetical membrane protein (DUF2391) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPZ1_9EURY
conserved hypothetical membrane protein (DUF2391)
Conserved hypothetical membrane protein (DUF2391) {ECO:0000313|EMBL:CCQ34114.1}; Putative integral membrane protein {ECO:0000313|EMBL:ERJ07337.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Haloba
qh_2_scaffold_78_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21467..22147
DNA (681bp) protein (227aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M593_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:EMA40977.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
qh_2_scaffold_78_25
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22247..23416)
DNA (1170bp) protein (390aa)
ABC transporter n=1 Tax=Halogranum salarium B-1 RepID=J3A3H7_9EURY
ABC transporter {ECO:0000313|EMBL:EJN59943.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
qh_2_scaffold_78_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23418..25175)
DNA (1758bp) protein (586aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP59_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ23664.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
qh_2_scaffold_78_27
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25446..26594)
DNA (1149bp) protein (383aa)
ABC transporter substrate-binding protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GZP4_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ76977.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lars
ThiB subfamily ABC transporter periplasmic binding protein
qh_2_scaffold_78_28
unknown

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comp(26829..27485)
DNA (657bp) protein (219aa)

This feature has no annotations

qh_2_scaffold_78_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27728..28204
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55048.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_2_scaffold_78_30
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28201..28356
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRN8_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33488.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
Displaying items 1-30 of 34 in total

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