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qh_2_scaffold_869

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_869_1

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160..510
DNA (351bp) protein (117aa)
GYD family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLB5_9ARCH
GYD family protein
GYD family protein {ECO:0000313|EMBL:AEN05664.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_2_scaffold_869_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1501..1893
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L866_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA28115.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_2_scaffold_869_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2243..5332
DNA (3090bp) protein (1030aa)
DNA mismatch repair protein MutS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKT0_9EURY
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
DNA mismatch repair protein MutS
qh_2_scaffold_869_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5298..7100
DNA (1803bp) protein (601aa)
DNA mismatch repair protein MutL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP70_9EURY
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
mutL; DNA mismatch repair protein MutL
qh_2_scaffold_869_5
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6903..8273)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AKE3_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY98392.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
hypothetical protein
qh_2_scaffold_869_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8511..8903)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47278.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_2_scaffold_869_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9097..9729
DNA (633bp) protein (211aa)
Lipoate-protein ligase A n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEP5_9EURY
Lipoate-protein ligase A {ECO:0000313|EMBL:ELZ33961.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
lipoate-protein ligase A
qh_2_scaffold_869_8
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9770..10651)
DNA (882bp) protein (294aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XG51_9EURY
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:ELY60695.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natr
5-carboxymethyl-2-hydroxymuconate isomerase
qh_2_scaffold_869_9
unknown

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10705..10962
DNA (258bp) protein (86aa)

This feature has no annotations

qh_2_scaffold_869_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11221..12606
DNA (1386bp) protein (462aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobac
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2Y0_9EURY
qh_2_scaffold_869_11
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12847..13089)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LBG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA30921.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qh_2_scaffold_869_12
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(13420..14271)
DNA (852bp) protein (284aa)
Blue (Type 1) copper domain-containing protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X2U1_9EURY
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:ELY55932.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natr
blue (type 1) copper domain-containing protein
qh_2_scaffold_869_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14546..15160
DNA (615bp) protein (205aa)
Male sterility domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYR3_9EURY
Male sterility domain protein {ECO:0000313|EMBL:EFW90329.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
hypothetical protein
qh_2_scaffold_869_14
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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15145..15522
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WH34_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB91472.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
qh_2_scaffold_869_15
unknown

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15522..15845
DNA (324bp) protein (108aa)

This feature has no annotations

qh_2_scaffold_869_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15943..16479)
DNA (537bp) protein (179aa)
Transcriptional regulator-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGF6_9EURY
Transcriptional regulator-like protein {ECO:0000313|EMBL:EMA44791.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
transcriptional regulator
qh_2_scaffold_869_17
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16561..16731)
DNA (171bp) protein (57aa)
DNA binding protein {ECO:0000313|EMBL:ELZ47873.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;"
hypothetical protein
qh_2_scaffold_869_18
unknown

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16913..17407
DNA (495bp) protein (165aa)

This feature has no annotations

qh_2_scaffold_869_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17404..18513
DNA (1110bp) protein (370aa)
PAS domain S-box n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N400_9EURY
PAS domain S-box {ECO:0000313|EMBL:EMA52273.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
PAS domain S-box
qh_2_scaffold_869_20
unknown

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19499..19708
DNA (210bp) protein (70aa)

This feature has no annotations

qh_2_scaffold_869_21
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19786..21324)
DNA (1539bp) protein (513aa)
Bacterio-opsin activator-like protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L145_9EURY
Bacterio-opsin activator-like protein {ECO:0000313|EMBL:EMA27282.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisal
PAS domain S-box
qh_2_scaffold_869_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21722..22174
DNA (453bp) protein (151aa)
Bacterio-opsin activator-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWP3_9EURY
Bacterio-opsin activator-like protein {ECO:0000313|EMBL:EFW91139.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
PAS/PAC sensor protein
Displaying 22 items

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