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qh_2_scaffold_1918

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_1918_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(166..762)
DNA (597bp) protein (199aa)
AsnC family transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP22_9EURY
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELZ24147.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
AsnC family transcriptional regulator
qh_2_scaffold_1918_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(849..1544)
DNA (696bp) protein (232aa)
Transcription repressor n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLM2_9EURY
Transcription repressor {ECO:0000313|EMBL:ELZ24146.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
DtxR family transcriptional regulator
qh_2_scaffold_1918_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1712..2107
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QQK0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09403.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
heat shock protein Hsp20
qh_2_scaffold_1918_4
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2239..2436)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J0J5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49882.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
qh_2_scaffold_1918_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2909..3778
DNA (870bp) protein (290aa)
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=24647905 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
preprotein translocase subunit SecF
qh_2_scaffold_1918_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3775..5376
DNA (1602bp) protein (534aa)
preprotein translocase subunit secd; K03072 preprotein translocase subunit SecD id=24655129 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Protein-export membrane protein SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
secD; protein-export membrane protein SecD
qh_2_scaffold_1918_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6030..6581)
DNA (552bp) protein (184aa)
UPF0218 protein C436_07373 n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K3K5_9EURY
conserved hypothetical protein (DUF359)
UPF0218 protein HLRTI_000604 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiama
qh_2_scaffold_1918_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6583..6780)
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
DNA-directed RNA polymerase subunit E
qh_2_scaffold_1918_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6780..7358)
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZV1_HALMD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV46859.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
qh_2_scaffold_1918_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7360..7737)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJW8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09427.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
nucleotide binding protein PINc
qh_2_scaffold_1918_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7734..8966)
DNA (1233bp) protein (411aa)
tif2g; translation initiation factor IF-2 subunit gamma; K03242 translation initiation factor 2 subunit 3 id=24649313 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1085028 species="Arc
translation initiation factor IF-2
qh_2_scaffold_1918_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9051..9530)
DNA (480bp) protein (160aa)
id=24648764 bin=uncultivated_archaeon_J07ABHX6 tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09897.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_2_scaffold_1918_13
unknown

Not on your lists

comp(9527..9694)
DNA (168bp) protein (56aa)

This feature has no annotations

qh_2_scaffold_1918_14
unknown

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comp(9971..10357)
DNA (387bp) protein (129aa)

This feature has no annotations

qh_2_scaffold_1918_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10363..11340
DNA (978bp) protein (326aa)
signal recognition particle n=1 Tax=Halomicrobium katesii RepID=UPI00036C4149
GTP-binding signal recognition particle SRP54 G-domain-containing protein
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
qh_2_scaffold_1918_16
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11423..11824
DNA (402bp) protein (134aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialb
DNA methylase N-4/N-6 domain protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZI6_NATMM
DNA methylase N-4/N-6 domain-containing protein
Displaying 16 items

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