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qh_2_scaffold_167

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_167_1
unknown

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)

This feature has no annotations

qh_2_scaffold_167_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(103..831)
DNA (729bp) protein (243aa)
Tetratricopeptide repeat protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QSF8_9EURY
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein
qh_2_scaffold_167_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

884..1447
DNA (564bp) protein (188aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=358396 species="Ar
2'-5' RNA ligase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LNI2_9EURY
2'-5' RNA ligase
qh_2_scaffold_167_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1729..1881
DNA (153bp) protein (51aa)
rpl39e; 50S ribosomal protein L39e; K02924 large subunit ribosomal protein L39e id=24654823 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
rpl39e; 50S ribosomal protein L39e
qh_2_scaffold_167_5
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1878..2156
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VHE1_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
ribosomal protein L31e
qh_2_scaffold_167_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2158..2826
DNA (669bp) protein (223aa)
translation initiation factor eIF-6; K03264 translation initiation factor 6 id=24644470 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor eIF-6
qh_2_scaffold_167_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2968..3963
DNA (996bp) protein (332aa)
phytoene synthase (EC:2.5.1.32); K02291 phytoene synthase [EC:2.5.1.32] id=24644471 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Phytoene synthase {ECO:0000313|EMBL:ERH08693.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ERH08693.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
Phytoene synthase
qh_2_scaffold_167_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4020..4265
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH10970.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_2_scaffold_167_9
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4309..5538
DNA (1230bp) protein (410aa)
NADH dehydrogenase n=1 Tax=Halomicrobium katesii RepID=UPI0003673C1B
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EMA39868.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sourc
qh_2_scaffold_167_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5654..6079)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKT1_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36456.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_2_scaffold_167_11
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6430..7515
DNA (1086bp) protein (362aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V246_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46406.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_2_scaffold_167_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7612..8538
DNA (927bp) protein (309aa)
Copper ABC transporter ATP-binding protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SI25_9EURY
abc25a; copper ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate copper) {ECO:0000313|EMBL:CAI48632.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
qh_2_scaffold_167_13
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8535..9377
DNA (843bp) protein (281aa)
NosY protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PH99_9EURY
NosY protein {ECO:0000313|EMBL:EMA69437.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
ABC transporter
qh_2_scaffold_167_14
unknown

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comp(9204..9638)
DNA (435bp) protein (145aa)

This feature has no annotations

qh_2_scaffold_167_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9670..10986
DNA (1317bp) protein (439aa)
manB4; phosphoglucomutase/phosphomannomutase (EC:5.4.2.2)
Phosphoglucosamine mutase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ99_9EURY
Phosphoglucosamine mutase {ECO:0000313|EMBL:ELZ27767.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
qh_2_scaffold_167_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11364..11942)
DNA (579bp) protein (193aa)
conserved hypothetical KaiC domain protein id=24646147 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10325.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_2_scaffold_167_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12022..14115)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWB7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26943.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_2_scaffold_167_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14540..16348
DNA (1809bp) protein (603aa)
Probable translation initiation factor IF-2 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQB4_HALUD
translation initiation factor IF-2
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
qh_2_scaffold_167_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16444..16656
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2L3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29690.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_2_scaffold_167_20
unknown

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comp(17125..17322)
DNA (198bp) protein (66aa)

This feature has no annotations

qh_2_scaffold_167_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17626..17862)
DNA (237bp) protein (79aa)
transcription regulator/DNA-binding protein id=24649367 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10463.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
transcriptional regulator
qh_2_scaffold_167_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18326..19465
DNA (1140bp) protein (380aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY00_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ELZ27488.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
qh_2_scaffold_167_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19540..20046
DNA (507bp) protein (169aa)
thioesterase n=1 Tax=Halomicrobium katesii RepID=UPI000367839D
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACV46868.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
qh_2_scaffold_167_24
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(20047..20955)
DNA (909bp) protein (303aa)
Beta-lactamase domain-containing protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY95_9EURY
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EMA25833.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
metallo-beta-lactamase
qh_2_scaffold_167_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21161..21736)
DNA (576bp) protein (192aa)
DNA-binding protein n=1 Tax=Halomicrobium katesii RepID=UPI00037F9633
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACV47778.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qh_2_scaffold_167_26
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22084..22833
DNA (750bp) protein (250aa)
Pantothenate synthetase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQF6_HALUD
hypothetical protein rbh
Pantothenate synthetase {ECO:0000313|EMBL:ACV12882.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
Displaying 26 items

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