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qh_2_scaffold_2500

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_2500_1
unknown

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2..406
DNA (405bp) protein (135aa)

This feature has no annotations

qh_2_scaffold_2500_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(522..965)
DNA (444bp) protein (148aa)
act; acyl-CoA thioester hydrolase (EC:3.1.2.-)
id=24633462 bin=Haloquadratum_walsbyi_J07HQW2 tax=Haloquadratum_walsbyi_J07HQW2
Acyl-CoA hydrolase {ECO:0000313|EMBL:ERG96248.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
qh_2_scaffold_2500_3
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1044..2075)
DNA (1032bp) protein (344aa)
Quinoprotein glucose dehydrogenase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CP23_9EURY
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ELZ24393.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salin
glucose/sorbosone dehydrogenase
qh_2_scaffold_2500_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2478..2906)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK59_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23621.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_2_scaffold_2500_5

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comp(2988..3179)
DNA (192bp) protein (64aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=halophilic archaeon DL31 RepID=G2MIP8_9ARCH
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEN04829.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_2_scaffold_2500_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3182..3493)
DNA (312bp) protein (104aa)
Thioredoxin reductase n=1 Tax=Halogranum salarium B-1 RepID=J3A1D6_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:EJN59128.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
thioredoxin reductase
qh_2_scaffold_2500_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3577..4098)
DNA (522bp) protein (174aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacte
cheD; chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JP95_HALVA
qh_2_scaffold_2500_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4101..4268)
DNA (168bp) protein (56aa)
Response regulator receiver protein {ECO:0000313|EMBL:ACV11136.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus uta
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY
qh_2_scaffold_2500_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4371..4676)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=G0HQW0_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58261.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
qh_2_scaffold_2500_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4888..5223)
DNA (336bp) protein (112aa)
Helix-turn-helix domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIX3_9EURY
transcriptional regulator-like protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ERJ05926.1}; Transcriptional regulator-like protein {ECO:0000313|EMBL:CCQ32939.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Haloba
qh_2_scaffold_2500_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5387..6112)
DNA (726bp) protein (242aa)
Circadian regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR61_9EURY
Circadian regulator {ECO:0000313|EMBL:ELZ25750.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
circadian regulator CirA
qh_2_scaffold_2500_12
unknown

Not on your lists

6275..6391
DNA (117bp) protein (39aa)

This feature has no annotations

qh_2_scaffold_2500_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6437..6607
DNA (171bp) protein (57aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=519442 species="Archaea; Euryarchaeota; Halobact
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUW3_HALUD
qh_2_scaffold_2500_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6604..7311
DNA (708bp) protein (236aa)
chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein CheR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR92_9EURY
Chemotaxis protein CheR {ECO:0000313|EMBL:ELZ25746.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
Displaying 14 items

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