ggKbase home page

qh_2_scaffold_412

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_412_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..150)
DNA (150bp) protein (50aa)
hypothetical protein id=24646399 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10575.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_2_scaffold_412_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(324..845)
DNA (522bp) protein (174aa)
Archaemetzincin {ECO:0000256|HAMAP-Rule:MF_01842}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_01842};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arc
Archaemetzincin n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKC7_9EURY
peptidase M54
qh_2_scaffold_412_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

882..1268
DNA (387bp) protein (129aa)
UPF0146 protein J07HX64_02349 {ECO:0000256|HAMAP-Rule:MF_00341}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
id=24646397 bin=halophilic_archaeon_J07HX64 tax=halophilic_archaeon_J07HX64
hypothetical protein
qh_2_scaffold_412_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1330..2289
DNA (960bp) protein (320aa)
Nucleotidyl transferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0X6_HALMD
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACV48991.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_2_scaffold_412_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2331..2636)
DNA (306bp) protein (102aa)
ATP-dependent helicase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MS47_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:EMA43461.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.
DEAD/DEAH box helicase
qh_2_scaffold_412_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2602..4599)
DNA (1998bp) protein (666aa)
ATP-dependent helicase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSR5_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:EFW92474.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
helicase with metal-binding cysteine cluster
qh_2_scaffold_412_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4676..5335)
DNA (660bp) protein (220aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeo
phosphodiesterase, MJ0936 family id=24647890 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA repair protein
qh_2_scaffold_412_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5539..7524
DNA (1986bp) protein (662aa)
DNA-binding protein MutS2 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJZ7_HALVA
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
DNA mismatch repair protein MutS
qh_2_scaffold_412_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7682..8809
DNA (1128bp) protein (376aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWX0_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
qh_2_scaffold_412_10
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8966..11143
DNA (2178bp) protein (726aa)
Extracellular solute-binding protein family 5 n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SYQ8_NATMM
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADD04169.1}; Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:ELY32955.1}; TaxID=547559 species="Archaea; Euryarchaeota;
qh_2_scaffold_412_11
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11188..12144
DNA (957bp) protein (319aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SYQ7_NATMM
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADD04168.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;
qh_2_scaffold_412_12
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12164..13093
DNA (930bp) protein (310aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SYQ6_NATMM
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ELY32953.1}; Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADD04167.1}; Tax
qh_2_scaffold_412_13
unknown

Not on your lists

comp(13069..13206)
DNA (138bp) protein (46aa)

This feature has no annotations

qh_2_scaffold_412_14
Erythrobacter longus, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13354..13608
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO92120.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter l
hypothetical protein
Displaying 14 items

View Taxonomy