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qh_2_scaffold_2656

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_2_scaffold_2656_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..634
DNA (633bp) protein (211aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5Z8_SALRM
ileS; isoleucyl-tRNA synthetase
qh_2_scaffold_2656_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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631..2112
DNA (1482bp) protein (494aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5Z8_SALRM
ileS; isoleucyl-tRNA synthetase
qh_2_scaffold_2656_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2198..2719
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B289
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43986.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_2_scaffold_2656_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2768..3211
DNA (444bp) protein (148aa)
RNA polymerase-binding protein DksA n=1 Tax=Salisaeta longa RepID=UPI0003B4E35E
dksA; DnaK suppressor protein
Putative RNA polymerase-binding protein DksA {ECO:0000313|EMBL:ABC45591.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qh_2_scaffold_2656_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3305..4222
DNA (918bp) protein (306aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJZ7_RHOMR
lipoprotein signal peptidase
qh_2_scaffold_2656_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4527..6404
DNA (1878bp) protein (626aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
GTP-binding protein LepA n=1 Tax=Salisaeta longa RepID=UPI0003B3591C
lepA; GTP-binding protein LepA
qh_2_scaffold_2656_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7624..8628
DNA (1005bp) protein (335aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
lepB; signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] id=24657258 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
lepB; signal peptidase I
qh_2_scaffold_2656_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8733..9818)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69DB9
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ACY48921.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qh_2_scaffold_2656_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10017..11108)
DNA (1092bp) protein (364aa)
TrkA-N domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKK8_RHOM4
TrkA-N domain-containing protein
TrkA-N domain protein {ECO:0000313|EMBL:ACY48920.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
qh_2_scaffold_2656_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11321..11608)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK04_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72760.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_2_scaffold_2656_11
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12268..12417
DNA (150bp) protein (50aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036F90F9
short-chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AAZ63197.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cup
Displaying 11 items

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