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qh_3_scaffold_201

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_201_1
unknown

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2..106
DNA (105bp) protein (35aa)

This feature has no annotations

qh_3_scaffold_201_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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283..528
DNA (246bp) protein (82aa)
Tyrosine recombinase xerD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4F3_SALRM
xerD; tyrosine recombinase XerD
Tyrosine recombinase xerD {ECO:0000313|EMBL:CBH22793.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_3_scaffold_201_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

543..806
DNA (264bp) protein (88aa)
phage integrase family site specific recombinase
Site-specific recombinase, phage integrase family, truncation {ECO:0000313|EMBL:ABC46367.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
phage integrase family site specific recombinase; K04763 integrase/recombinase XerD id=24658828 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_3_scaffold_201_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1024..2379)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GYI5_9PROT
MFS transporter {ECO:0000313|EMBL:KIJ78641.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
major facilitator superfamily protein
qh_3_scaffold_201_5
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2423..2902)
DNA (480bp) protein (160aa)
flavoprotein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI0003489E1F
Flavoprotein WrbA {ECO:0000313|EMBL:EGL83385.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
wrbA; flavoprotein WrbA
qh_3_scaffold_201_6
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2909..3088)
DNA (180bp) protein (60aa)
Flavoprotein WrbA n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5I7_9BACI
Flavoprotein WrbA {ECO:0000313|EMBL:EGL83385.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
wrbA; flavoprotein WrbA
qh_3_scaffold_201_7
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3250..3702)
DNA (453bp) protein (151aa)
Transcriptional regulator, MarR family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K2C1_DESAC
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EAT16518.1}; TaxID=281689 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" so
MarR family transcriptional regulator
qh_3_scaffold_201_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3749..4660)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035FEBD3
Uncharacterized protein {ECO:0000313|EMBL:BAR58131.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
FMN-dependent NADH-azoreductase
qh_3_scaffold_201_9
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4967..6067
DNA (1101bp) protein (367aa)
gltA; citrate (si)-synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;"
Citrate synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAN4_HALMT
qh_3_scaffold_201_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6116..7537
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAI3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63018.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
qh_3_scaffold_201_11
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7714..8103
DNA (390bp) protein (130aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI56_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EJF09996.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Ponti
glyoxalase
qh_3_scaffold_201_12
unknown

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8155..8349
DNA (195bp) protein (65aa)

This feature has no annotations

qh_3_scaffold_201_13
unknown

Not on your lists

8400..8981
DNA (582bp) protein (194aa)

This feature has no annotations

qh_3_scaffold_201_14
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9080..9700
DNA (621bp) protein (207aa)
RNA polymerase sigma factor n=1 Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39RW4_GEOMG
RNA polymerase sigma factor SigZ
RNA polymerase sigma factor {ECO:0000313|EMBL:ABB33010.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metal
qh_3_scaffold_201_15
unknown

Not on your lists

10020..10313
DNA (294bp) protein (98aa)

This feature has no annotations

qh_3_scaffold_201_16
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10296..11108)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000368F850
Uncharacterized protein {ECO:0000313|EMBL:EAT16357.1}; TaxID=281689 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuro
hypothetical protein
qh_3_scaffold_201_17
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11486..12259)
DNA (774bp) protein (258aa)
integrase n=1 Tax=Salisaeta longa RepID=UPI0003B71FC4
Cointegrate resolution protein S {ECO:0000313|EMBL:EGK13907.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
integrase family protein
Displaying 17 items

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