ggKbase home page

qh_3_scaffold_2516

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_3_scaffold_2516_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=V5TNH2_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66094.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qh_3_scaffold_2516_2
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(374..955)
DNA (582bp) protein (194aa)
HoxA-like transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTR9_HALAR
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF27225.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qh_3_scaffold_2516_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1098..1679
DNA (582bp) protein (194aa)
Zn-dependent hydrolase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKW7_9EURY
Zn-dependent hydrolase {ECO:0000313|EMBL:ERH11106.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
beta-lactamase domain protein
qh_3_scaffold_2516_trna_1
unknown

Not on your lists

1768..1842
DNA (75bp)
transferRNA
qh_3_scaffold_2516_4
unknown

Not on your lists

2115..2291
DNA (177bp) protein (59aa)

This feature has no annotations

qh_3_scaffold_2516_5
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2214..2627)
DNA (414bp) protein (138aa)
putative toxin-antitoxin system toxin component, PIN family id=24624665 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:ERH00009.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;"
putative toxin-antitoxin system toxin component, PIN family
qh_3_scaffold_2516_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2624..2887)
DNA (264bp) protein (88aa)
AbrB family transcription regulator n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EN7_HALWD
transcription regulator
AbrB/VapB family protein {ECO:0000313|EMBL:CAJ53584.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strai
qh_3_scaffold_2516_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3128..3403
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PKZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG90065.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_3_scaffold_2516_8
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3403..3729
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PQ36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA72066.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
qh_3_scaffold_2516_9
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3955..4380)
DNA (426bp) protein (142aa)
NifU-like protein n=4 Tax=Haloarcula RepID=Q5UY39_HALMA
nifU1; NifU-like protein
NifU-like protein {ECO:0000313|EMBL:AAV47814.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATC
Displaying 10 items

View Taxonomy